Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 5 Aligned Residues 241 % Identity 29% Template c2bgjB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:ferredoxin-nadp(h) reductase; PDBTitle: x-ray structure of the ferredoxin-nadp(h) reductase from2 rhodobacter capsulatus at 2.1 angstroms Resolution 2.1 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																								.															.
Query SS confidence																								.															.
Query Sequence		G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	V	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	.	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	L	S	P	R	L	A	A	L	K	P
Query Conservation																								.															.
Alig confidence																								.															.
Template Conservation
Template Sequence		Q	T	V	T	S	V	R	H	W	T	D	T	L	F	S	F	R	V	T	R	P	Q	T	L	R	F	R	S	G	E	F	V	M	I	G	L	L	D	D	N	G	K	P	I	M	R	A	Y	S	I	A	S	P	A	W	D	E	E	L	E	F	Y	S	I	K	V	P	D	G	P	L	T	S	R	L	Q	H	I	K	V
Template Known Secondary structure												T	T										T	T					T	T										T	T	S											S		T	T		S										T	T		T	T					T	T			T
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q	E	L	E	K	R	Y	E	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		G	E	Q	I	I	L	R	P	K	P	V	G	T	L	V	I	D	A	L	L	P	G	K	R	L	W	F	L	A	T	G	T	G	I	A	P	F	A	S	L	M	R	E	P	E	A	Y	E	K	F	D	E	V	I	M	M	H	A	C	R	T	V	A	E	L	E	Y	G	R	Q	L	V	E	A	L	Q	E	D	P	L
Template Known Secondary structure		T												S		S	G	G	G	B				S								G	G	G	G							T	T									S									S	S	G	G	G	G													S	T	T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
						164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																										.
Query SS confidence		.	.	.	.																																										.
Query Sequence		.	.	.	.	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	.	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R
Query Conservation		.	.	.	.																																										.
Alig confidence		.	.	.	.																																										.
Template Conservation
Template Sequence		I	G	E	L	V	E	G	K	L	K	Y	Y	P	T	T	T	R	E	E	F	H	H	M	G	R	I	T	D	N	L	A	S	G	K	V	F	E	D	L	G	I	A	P	M	N	P	E	T	D	R	A	M	V	C	G	S	L	A	F	N	V	D	V	M	K	V	L	E	S	Y	G	L	R	E	G	A	N	S	E	P
Template Known Secondary structure						T		S									S	S	S			S	S	B	S									S							T						T	T	T																						T	T			B			S	S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	H	M	T	A	E	H	Y	W
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		R	.	E	F	V	V	E	K	A	F
Template Known Secondary structure		B	.	S						S	S
Template Predicted Secondary structure			.
Template SS confidence
		259		260	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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