Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 15 Aligned Residues 245 % Identity 20% Template c2b5oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:ferredoxin--nadp reductase; PDBTitle: ferredoxin-nadp reductase Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.						.	.	.
Predicted Secondary structure																			.	.	.	.	.												.	.																				.	.	.	.															.	.	.	.	.
Query SS confidence																			.	.	.	.	.												.	.																				.	.	.	.															.	.	.	.	.
Query Sequence		M	A	D	W	V	T	G	K	V	T	K	V	Q	N	W	T	D	.	.	.	.	.	A	L	F	S	L	T	V	H	A	P	V	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	.	.	.	.	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	P	.	.	.	.	.	D	L	E
Query Conservation																			.	.	.	.	.												.	.																				.	.	.	.															.	.	.	.	.
Alig confidence																			.	.	.	.	.												.	.																				.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		P	K	T	P	F	L	G	K	C	I	E	N	Y	E	L	V	D	E	G	G	S	G	T	V	R	H	V	T	F	D	I	S	E	G	D	L	R	Y	L	E	G	Q	S	I	G	I	I	P	P	G	E	D	K	N	G	K	P	H	K	L	R	L	Y	S	I	A	S	T	R	H	G	D	M	E	D	N	K	T	V	S
Template Known Secondary structure		S	S	S													S		T	T			S										T	T	S						T	T								S	S			T	T	T										B		S		T	T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		65	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.
Query Sequence		F	Y	L	V	T	V	P	.	.	.	.	.	.	.	.	.	.	D	G	K	L	S	P	R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F
Query Conservation									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	C	V	R	Q	L	E	Y	Q	D	P	E	S	G	E	T	V	Y	G	V	C	S	T	Y	L	C	N	L	P	V	G	T	D	D	V	K	I	T	G	P	V	G	K	E	M	L	L	P	D	D	E	D	A	T	V	V	M	L	A	T	G	T	G	I	A	P	F	R	A	F	L	W	R	M	F	K	E	Q	H	E
Template Known Secondary structure												T	T	T														T			T	T												S	T	T				S		T	T									G	G	G	G												T				S
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
		135						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.																																										.
Query SS confidence			.	.	.	.	.																																										.
Query Sequence		K	.	.	.	.	.	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q	E	L	E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	.	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H
Query Conservation			.	.	.	.	.																																										.
Alig confidence			.	.	.	.	.																																										.																									.	.
Template Conservation																																																																										.	.
Template Sequence		D	Y	K	F	K	G	K	A	W	L	I	F	G	V	P	Y	T	A	N	I	L	Y	K	D	D	F	E	K	M	A	A	E	N	P	D	N	F	R	L	T	Y	A	I	S	R	E	Q	K	T	A	D	G	G	K	V	Y	V	Q	S	R	V	S	E	Y	A	D	E	L	F	E	M	I	.	.	Q	K	P	N	T	H
Template Known Secondary structure		S					S									S	S	G	G	G		T	T												T	T	T								T	T	T		B		T	T	S		B										T									.	.	T	S	T	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350			.	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.				.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.											.	.	.
Query SS confidence																				.	.	.	.											.	.	.
Query Sequence		V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	.	.	.	.	E	T	R	Q	M	T	K	H	L	R	.	.	.	R	R	P	G	H	M	T	A	E	H	Y
Query Conservation																				.	.	.	.											.	.	.
Alig confidence																				.	.	.	.											.	.	.
Template Conservation
Template Sequence		V	Y	M	C	G	L	K	G	M	Q	P	P	I	D	E	T	F	T	A	E	A	E	K	R	G	L	N	W	E	E	M	R	R	S	M	K	K	E	H	R	W	H	V	E	V	Y
Template Known Secondary structure								G	G	G															T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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