Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 14 Aligned Residues 226 % Identity 19% Template c1tvcA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methane monooxygenase component c; PDBTitle: fad and nadh binding domain of methane monooxygenase2 reductase from methylococcus capsulatus (bath) Resolution UNK

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.								.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.																																	.
Query SS confidence																										.	.	.	.	.	.	.																																	.
Query Sequence		V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	V	.	.	.	.	.	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	.	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	L	S
Query Conservation																										.	.	.	.	.	.	.																																	.
Alig confidence																										.	.	.	.	.	.	.																		.	.														.
Template Conservation																																																		.	.
Template Sequence		F	E	A	E	V	V	G	L	N	W	V	S	S	N	T	V	Q	F	L	L	Q	K	R	P	D	E	C	G	N	R	G	V	K	F	E	P	G	Q	F	M	D	L	T	I	P	G	T	D	.	.	V	S	R	S	Y	S	P	A	N	L	P	N	P	E	G	R	L	E	F	L	I	R	V	L	P	E	G	R	F	S
Template Known Secondary structure						B								T	T								S	S	T	T	S	S	S	S	S			S			S								T	T	S		S	.	.	S	S						B			S	S	S	S											T	T	S	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		D	Y	L	R	N	D	A	R	V	G	Q	V	L	S	V	K	G	P	L	G	V	F	G	L	.	K	E	R	G	M	A	P	R	Y	F	V	A	G	G	T	G	L	A	P	V	V	S	M	V	R	Q	M	Q	E	W	T	A	P	N	E	T	R	I	Y	F	G	V	N	T	E	P	E	L	F	Y	I	D	E	L	K
Template Known Secondary structure								S	S	S	S	S												S		.				S	S	S								S	S	T	T														T			S									S	S	S	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		S	L	E	R	S	M	R	N	L	T	V	K	A	C	V	W	H	P	S	G	D	W	E	G	E	Q	G	S	P	I	D	A	L	R	E	D	L	E	S	.	.	.	.	.	.	.	S	D	A	N	P	D	I	Y	L	C	G	P	P	G	M	I	D	A	A	C	E	L	V	R	S	R	G	I	P	G	E	Q	V	F
Template Known Secondary structure							S	S	S								S	S		S	S			S	S	S	S	S	S	S	S										.	.	.	.	.	.	.	S	S	S	S	S						S	S																			S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.								.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		237	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	E	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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