Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 3 Aligned Residues 223 % Identity 26% Template c1krhA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:benzoate 1,2-dioxygenase reductase; PDBTitle: x-ray stucture of benzoate dioxygenase reductase Resolution 1.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.
Query SS confidence																										.	.	.	.
Query Sequence		W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	.	.	.	.	V	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	L	S	P	R	L
Query Conservation																										.	.	.	.
Alig confidence																										.	.	.	.																			.	.
Template Conservation																																																.	.
Template Sequence		H	F	E	G	T	L	A	R	V	E	N	L	S	D	S	T	I	T	F	D	I	Q	L	D	D	G	Q	P	D	I	H	F	L	A	G	Q	Y	V	N	V	T	L	P	G	T	T	.	.	E	T	R	S	Y	S	F	S	S	Q	P	G	N	R	L	T	G	F	V	V	R	N	V	P	Q	G	K	M	S	E	Y	L
Template Known Secondary structure													S	S	S	S										T	T								T	T								T	T	S	S	.	.									S		T	T		S										T	T
Template Predicted Secondary structure																																																.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		A	A	.	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q	E	L
Query Conservation				.
Alig confidence				.																			.	.	.
Template Conservation																							.	.	.
Template Sequence		S	V	Q	A	K	A	G	D	K	M	S	F	T	G	P	F	G	S	F	Y	L	.	.	.	R	D	V	K	R	P	V	L	M	L	A	G	G	T	G	I	A	P	F	L	S	M	L	Q	V	L	E	Q	K	G	S	E	H	P	V	R	L	V	F	G	V	T	Q	D	C	D	L	V	A	L	E	Q	L	D	A	L
Template Known Secondary structure			T	T			T	T											S		S		.	.	.				S	S								G	G	G																	S	S									S	S	G	G	G
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R
Query Conservation
Alig confidence								.																															.	.	.	.	.	.	.	.
Template Conservation								.																															.	.	.	.	.	.	.	.
Template Sequence		Q	Q	K	L	P	W	.	F	E	Y	R	T	V	V	A	H	A	E	S	Q	H	E	R	K	G	Y	V	T	G	H	I	E	Y	D	W	L	N	.	.	.	.	.	.	.	.	G	G	E	V	D	V	Y	L	C	G	P	V	P	M	V	E	A	V	R	S	W	L	D	T	Q	G	I	Q	P	A	N	F	L	F	E
Template Known Secondary structure						T	T	.								T	T			S	S	S	S			S		S	G	G	G			G	G	G	G	G	.	.	.	.	.	.	.	.	G	G		S																						T				S
Template Predicted Secondary structure								.																															.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		239	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		334	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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