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Job DescriptionP28861
Confidence100.00%DateThu Jan 5 11:45:15 GMT 2012
Rank16Aligned Residues237
% Identity22%Templatec1jb9A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: crystal structure of the ferredoxin:nadp+ reductase from maize root at2 1.7 angstroms
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10...... ...20....... ..30.........40..... ....50........ .60.......
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Query Sequence  VTGKVTKVQNWT. . . . . DALFSLTVHAP. VLPFTAGQFTKLGLEIDG. . . . . . ERVQRAYSYVNSP. . . . . DNPDLEFYL
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Template Sequence  FTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCV
Template Known Secondary structure 
S
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TTSS


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SSB
TTSTT
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B
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   68.70. ........80.........90.........100.........110.........120.........130....
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Query Sequence  VTVP. . . . . . . . . . . . . DGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILQLGKDLDRF
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Template Sequence  RRAVYYDPETGKEDPSKNGVCSNFLCNSKPGDKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVP
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B
TTT

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GGGS
T

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STT



S
TT
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T
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   135 ....140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  K. . . . . NLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHV
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Template Sequence  NYRFGGLAWLFLGVANSDSLLYDEEFTSYLKQYPDNFRYDKALSREQKGKM. . . YVQDKIEEYSDEIFKLLD. . . GGAHI
Template Known Secondary structure  T



SSSGGG
SS
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   194.....200.........210.........220.........230.........240.... .....250.........260.. .....
 
   210....... ..220.........230...... ...240.......
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Query Sequence  MLCGNPQM. . . . VRDTQQLLKETRQMTKHLR. . . RRPGHMTAEHY
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Template Sequence  YFCGLKGMMPGIQDTLKKVAERRGESWDQKLAQLKKNKQWHVEVY
Template Known Secondary structure 
GGGT

TT

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   272.......280.........290.........300.........310......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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