Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 18 Aligned Residues 216 % Identity 13% Template c1ep3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit); PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. Resolution 2.10 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																											.	.																																	.
Query SS confidence																											.	.																																	.
Query Sequence		W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	V	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	.	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	L	S	P	R	L	A
Query Conservation																											.	.																																	.
Alig confidence																											.	.																																	.
Template Conservation
Template Sequence		Q	E	M	M	T	V	V	S	Q	R	E	V	A	Y	N	I	F	E	M	V	L	K	G	T	L	V	D	E	M	D	L	P	G	Q	F	L	H	L	A	V	P	N	G	A	M	L	L	R	R	P	I	S	I	S	S	W	D	K	R	A	K	T	C	T	I	L	Y	R	I	G	D	E	T	T	G	T	Y	K	L	S
Template Known Secondary structure															T	T								S	G	G	G	G	G			S	T	T								S		T	T			S											T	T	T	T											T	T	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y	L	P	L	M	Q	E	L	E	K
Query Conservation
Alig confidence																																																						.	.
Template Conservation																																																						.	.
Template Sequence		K	L	E	S	G	A	K	V	D	V	M	G	P	L	G	N	G	F	P	V	A	E	V	T	S	T	D	K	I	L	I	I	G	G	G	I	G	V	P	P	L	Y	E	L	A	K	Q	L	E	K	T	G	.	.	C	Q	M	T	I	L	L	G	F	A	S	E	N	V	K	I	L	E	N	E	F	S	N	L	K	N
Template Known Secondary structure		T			T	T										S	B					T	T			T	T	S								G	G	G	S														T	.	.										S	S	G	G	G									T	S	T	T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M	T	K	H	L	R	R	R	P	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		V	.	.	.	.	.	.	.	T	L	K	I	A	T	D	D	G	S	Y	G	T	K	G	H	V	G	M	L	M	N	E	I	D	.	.	.	.	.	.	.	.	.	.	F	E	V	D	A	L	Y	T	C	G	A	P	A	M	L	K	A	V	A	K	K	Y	D	Q	L	E	.	.	.	.	.	.	.	.	.	R	L
Template Known Secondary structure			.	.	.	.	.	.	.							T	T		S	S	S			S											.	.	.	.	.	.	.	.	.	.	S			S						S												T	T	T		S	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure			.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
		163								.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.										.	.
		241	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	M	T	A	E	H	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	I	S	M	E	S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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