Job Description P28861 Confidence 100.00% Date Thu Jan 5 11:45:15 GMT 2012 Rank 12 Aligned Residues 233 % Identity 17% Template c1cqxB_ PDB info PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution Resolution 1.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																												.	.	.	.														.	.																																		.	.
Query SS confidence																												.	.	.	.														.	.																																		.	.
Query Sequence		D	W	V	T	G	K	V	T	K	V	Q	N	W	T	D	A	L	F	S	L	T	V	H	A	P	V	.	.	.	.	L	P	F	T	A	G	Q	F	T	K	L	G	L	.	.	E	I	D	G	E	R	V	Q	R	A	Y	S	Y	V	N	S	P	D	N	P	D	L	E	F	Y	L	V	T	V	P	D	G	K	.	.
Query Conservation																												.	.	.	.														.	.																																		.	.
Alig confidence																												.	.	.	.														.	.																																		.	.
Template Conservation
Template Sequence		G	W	R	T	F	V	I	R	E	K	R	P	E	S	D	V	I	T	S	F	I	L	E	P	A	D	G	G	P	V	V	N	F	E	P	G	Q	Y	T	S	V	A	I	D	V	P	A	L	G	L	Q	Q	I	R	Q	Y	S	L	S	D	M	P	N	G	R	T	Y	R	I	S	V	K	R	E	G	G	G	P	Q	P
Template Known Secondary structure		S													S	S	S									T	T									T	T										T	T	T	T											S				S	S										S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
					75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	L	S	P	R	L	A	A	L	K	P	G	D	E	V	Q	V	V	S	E	A	A	G	F	F	V	L	D	E	V	P	H	C	E	T	L	W	M	L	A	T	G	T	A	I	G	P	Y	L	S	I	L	Q	L	G	K	D	L	D	R	F	K	N	L	V	L	V	H	A	A	R	Y	A	A	D	L	S	Y
Query Conservation		.	.	.
Alig confidence		.	.	.																											.																																		.
Template Conservation																															.																																		.
Template Sequence		P	G	Y	V	S	N	L	L	H	D	H	V	N	V	G	D	Q	V	K	L	A	A	P	Y	G	S	F	H	I	.	D	V	D	A	K	T	P	I	V	L	I	S	G	G	V	G	L	T	P	M	V	S	M	L	K	V	A	L	Q	A	P	P	R	.	Q	V	V	F	V	H	G	A	R	N	S	A	V	H	A	M
Template Known Secondary structure															T	T									B		S		S		.		T	T			S							S	S														T		S	S			.											T	T	S
Template Predicted Secondary structure																															.																																		.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	L	M	Q	E	L	E	K	R	Y	E	G	K	L	R	I	Q	T	V	V	S	R	E	T	A	A	G	S	L	T	G	R	I	P	A	L	I	E	S	G	E	L	E	S	T	I	G	L	P	M	N	K	E	T	S	H	V	M	L	C	G	N	P	Q	M	V	R	D	T	Q	Q	L	L	K	E	T	R	Q	M
Query Conservation
Alig confidence													.																										.	.
Template Conservation													.																										.	.
Template Sequence		R	D	R	L	R	E	A	A	K	T	Y	.	E	N	L	D	L	F	V	F	Y	D	Q	P	L	P	E	D	V	Q	G	R	D	Y	D	Y	P	.	.	G	L	V	D	V	K	Q	I	E	K	S	I	L	L	P	D	A	D	Y	Y	I	C	G	P	I	P	F	M	R	M	Q	H	D	A	L	K	N	L	G	I	H
Template Known Secondary structure													.	T	T								S	S			T	T			B	T	T	T	B	S			.	.	S	S			T	T	T	S							T	T							S	S													T	T	T
Template Predicted Secondary structure													.																										.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.			.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	H	L	R	R	R	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	R	I	H	Y	E	V	F
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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