Job Description P0A9G8 Confidence 95.92% Date Thu Jan 5 11:10:10 GMT 2012 Rank 107 Aligned Residues 85 % Identity 12% Template d1ku9a_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain DNA-binding protein Mj223 Resolution 2.80

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																		.	.	.																																												.	.
Query SS confidence																		.	.	.																																												.	.
Query Sequence		A	D	P	R	R	I	S	L	L	K	H	I	A	L	S	G	.	.	.	S	I	S	Q	G	A	K	D	A	G	I	S	Y	K	S	A	W	D	A	I	N	E	M	N	Q	L	S	E	H	I	L	V	E	R	A	T	G	G	K	G	G	G	G	.	.	A	V	L	T	R	Y	G	Q	R	L	I	Q	L	Y	D	L
Query Conservation																		.	.	.																																												.	.
Alig confidence																		.	.	.																											.	.	.															.	.										.
Template Conservation																																															.	.	.																										.
Template Sequence		L	N	K	S	V	G	A	V	Y	A	I	L	Y	L	S	D	K	P	L	T	I	S	D	I	X	E	E	L	K	I	S	K	G	N	V	S	X	S	L	K	K	L	E	E	L	.	.	.	G	F	V	R	K	V	W	I	K	G	E	R	K	N	Y	Y	E	A	V	D	G	F	S	S	I	.	K	D	I	A	K	R
Template Known Secondary structure																	S	S												T																T	.	.	.	T	S							T	T		S	S													.
Template Predicted Secondary structure																																															.	.	.																										.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.				.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	I	Q	Q	K	A	F	D	V	L	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	H	D	L	I	A	K	T	Y	E	D	L	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions