Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9G8
Confidence55.88%DateThu Jan 5 11:10:10 GMT 2012
Rank307Aligned Residues129
% Identity9%Templated1al3a_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   115....120.........130.........140.........150 .........160.........170.........180....
Predicted Secondary structure 











..........


















Query SS confidence 



































. . . . . . . . . .

































Query Sequence  LAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVL. . . . . . . . . . LADGKTRLKVAITAQSGARLGLDEGKEVLILLKA
Query Conservation                   
              
   ..........
  
  

                          
Alig confidence 



































..........

































Template Conservation   
 



         
   
  
    
 
 
 
       
   
     
                           
Template Sequence  KGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEALHLYDDLVMLPCYHWNRSIV
Template Known Secondary structure 
TS
T

TT

SSS


TTS

Template Predicted Secondary structure 


































Template SS confidence 















































































   92.......100.........110.........120.........130.........140.........150.........160.........170.
 
   185....190.........200......... 210.........220.........230.........240...
Predicted Secondary structure 
















..............















Query SS confidence 
























. . . . . . . . . . . . . .

































Query Sequence  PWVGITQDEAVAQNADNQLPGIISH. . . . . . . . . . . . . . IERGAEQCEVLMALPDGQTLCATVPVNEATSLQQ
Query Conservation                        
  ..............         
         
 
 
     
 
  
Alig confidence 
























..............

































Template Conservation                                                                
  
 

  

Template Sequence  VTPEHPLATKGSVSIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTPRIVFTATDADVIKTYVRLGLGVGVIA
Template Known Secondary structure 
TTSTTTTTS


TS
TTSTTT


SSTS
Template Predicted Secondary structure 






































Template SS confidence 








































































   172.......180.........190.........200.........210.........220.........230.........240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions