Job Description P0A9G8 Confidence 75.24% Date Thu Jan 5 11:10:10 GMT 2012 Rank 221 Aligned Residues 129 % Identity 10% Template c2f7cA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:hth-type transcriptional regulator catm; PDBTitle: catm effector binding domain with its effector cis,cis-muconate Resolution 2.16 Å

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		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150											.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	A	I	S	R	F	S	L	Q	T	S	A	R	N	Q	W	F	G	T	I	T	A	R	D	H	D	D	V	Q	Q	H	V	D	V	L	.	.	.	.	.	.	.	.	.	.	L	A	D	G	K	T	R	L	K	V	A	I	T	A	Q	S	G	A	R	L	G	L	D	E	G	K	E	V	L	I	L	L	K	A
Query Conservation																																						.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	T	L	R	I	G	Y	V	S	S	L	L	Y	G	L	L	P	E	I	I	Y	L	F	R	Q	Q	N	P	E	I	H	I	E	L	I	E	C	G	T	K	D	Q	I	N	A	L	K	Q	G	K	I	D	L	G	F	G	R	L	K	I	T	D	P	A	I	R	R	I	V	L	H	K	E	Q	L	K	L	A	I
Template Known Secondary structure											G	G	G	G	G	T	T													T	T	S																		T	T	S		S					S	S				B	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.																		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	W	V	G	I	T	Q	D	E	A	V	A	Q	N	A	D	N	Q	L	P	G	I	I	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	R	G	A	E	Q	C	E	V	L	M	A	L	P	D	G	Q	T	L	C	A	T	V	P	V	N	E	A	T	S	L	Q	Q
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	H	H	H	P	N	Q	F	A	A	T	G	V	H	L	S	Q	I	I	D	E	P	M	L	L	Y	P	V	S	Q	K	P	N	F	A	T	F	I	Q	S	L	F	T	E	L	G	L	V	P	S	K	L	T	E	I	R	E	I	Q	L	A	L	G	L	V	A	A	G	E	G	V	C	I	V	P
Template Known Secondary structure			T	T	S		T	T	T	S		T	T		B		G	G	G	G	T	T	S								S	S	S	S	S											T	T	T				S						S	S											T	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions