Job Description P0A9G8 Confidence 30.10% Date Thu Jan 5 11:10:10 GMT 2012 Rank 377 Aligned Residues 43 % Identity 12% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.					.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.																				.	.	.	.
Query SS confidence																.	.	.	.	.																				.	.	.	.
Query Sequence		F	A	D	P	R	R	I	S	L	L	K	H	I	A	.	.	.	.	.	L	S	G	S	I	S	Q	G	A	K	D	A	G	I	S	Y	K	S	A	.	.	.	.	W	D	A	I	N	E	M	N	Q	L
Query Conservation																.	.	.	.	.																				.	.	.	.
Alig confidence																.	.	.	.	.																				.	.	.	.
Template Conservation
Template Sequence		K	L	S	E	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K	A	L	R	K	L	K	Y	H
Template Known Secondary structure		S	S		T	T	T	T					T	T	S	S	T	T	S	S										T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions