Return to main results Retrieve Phyre Job Id

Job DescriptionP45425
Confidence99.70%DateThu Jan 5 12:02:38 GMT 2012
Rank41Aligned Residues165
% Identity20%Templated2ch5a1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  ITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGAD. . . . .
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Template Sequence  GTGSNCRLINPDGSESGCGGWGHMMGDEGSAYWIAHQAV. . . . KIVFDSIDNLEAAPHDIGYVKQAMFHYFQVPDRLGIL
Template Known Secondary structure  SSS
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   126...130.........140.........150.........160.... .....170.........180.........190.........200.
 
   196...200.........210.........220.........230..... ....240...... ...250.
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Query Sequence  . . . . . . . . . . . . . . . AKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQ. . . . . . . . CVVVGGSVGLA. EGYLA
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Template Sequence  THLYRDFDKCRFAGFCRKIAEGAQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKE
Template Known Secondary structure  TTTTTT

TTTT
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   202.......210.........220.........230.........240.........250.........260.........270.........280.
 
   252.......260.........270.........280.........
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Query Sequence  LVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQGE
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Template Sequence  GFLLALTQGRAQNFFSSFTLMKLRHSSALGGASLGARH
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   282.......290.........300.........310.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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