Return to main results Retrieve Phyre Job Id

Job DescriptionP45425
Confidence97.27%DateThu Jan 5 12:02:38 GMT 2012
Rank103Aligned Residues156
% Identity11%Templated1zbsa1
SCOP infoRibonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   121........130.........140.........150...... ...160.........170.........180...... ...190..
Predicted Secondary structure 




















.......













.



Query SS confidence 



































. . . . . . .





























.





Query Sequence  ITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGH. . . . . . . TLADPHGPVCGCGRTGCVEAIASGRGIAAA. AQGELA
Query Conservation             
 
           
  
 
   
 .......            
     
   
   
   .      
Alig confidence 



































.......





























.





Template Conservation 



     
        

 
  






  

  

   
    
  
              

   
        
Template Sequence  GTGSNSCLFDGREIKANVSPLGYILGDEGSGAVLGRLFIGSLLKGQXPEGLCEAFLQEYGLTSADIIESVYRKPFPNRFL
Template Known Secondary structure  SSS
SSS





TTSTT
S
TTTT

SS
Template Predicted Secondary structure 





























Template SS confidence 















































































   117..120.........130.........140.........150.........160.........170.........180.........190......
 
   193......200.........210.........220.........230...... ...240.........250.........260.........270
Predicted Secondary structure 








..








Query SS confidence 











































. .

































Query Sequence  GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQC. . VVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLA
Query Conservation        
      

  
  
       

  
  
   
 
  ..


 
 
             
          
  
Alig confidence 








..

















...











..









..





















Template Conservation 
  
  
  ..   
  
  

  
  
 ...    
        

  




  ..    
             
   
Template Sequence  AGFSPFIAQ. . HLDIPAVYSLVQNSFDDF. . . LVRNVLRYNRPDLPLHFIGSVAFH. . YREVLSSVIKKRGLTLGSVLQS
Template Known Secondary structure  TTT..TTTS...TGGG

TTS
S..TTT

S
Template Predicted Secondary structure  ..



...








..










Template SS confidence 















































































   197..200..... ....210.........220... ......230.........240....... ..250.........260.........
 
   271........280.........290
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  AHYRHDAGLLGAALLAQGEK
Query Conservation            


 

    
Alig confidence  .......












Template Conservation  .......
  


 
     
Template Sequence  . . . . . . . PXEGLIQYHHNNH
Template Known Secondary structure  .......S

Template Predicted Secondary structure  .......

Template SS confidence 



















   270.........280..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions