 |
Job Description | P45425 | Confidence | 93.40% | Date | Thu Jan 5 12:02:38 GMT 2012 |
Rank | 139 | Aligned Residues | 103 |
% Identity | 17% | Template | d1okja1 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| YeaZ-like
|
Resolution | 2.28 |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | T | L | A | I | D | I | G | G | T | K | L | A | A | A | L | I | G | A | D | G | Q | I | R | D | R | R | E | L | P | T | P | A | S | Q | T | P | E | A | L | R | D | A | L | S | A | L | V | S | P | L | Q | A | H | A | Q | R | V | A | I | A | S | T | G | I | I | R | D | G | S | L | L | A | L | N | P | H | N | L | G |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|   |   |   |   |   |
|
|
|   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
| . | . |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|   |   |
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Sequence |   |
R | I | L | A | I | D | T | A | T | E | A | C | S | V | A | L | W | N | . |
D | G | T | V | N | A | H | F | E | L | C | P | R | E | H | T | . |
. |
Q | R | I | L | P | M | V | Q | D | I | L | T | T | S | G | T | S | L | T | D | I | N | A | L | A | Y | G | R | G | P | . |
. |
. |
. |
. |
. |
. |
. |
G | S | F | T | G |
Template Known Secondary structure |   |
|  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  |  |  |
|
| S | S | T | T | . | . | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |
|
|  |  |  |  |  |  |  | S | . | . | . | . | . | . | . | . | S |
|  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | |
. | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | |
|
. | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | L | L | H | F | P | L | V | K | T | L | E | Q | L | T | N | L | P | T | I | A | I | N | D | A | Q | A | A | A | W | A | E | F | Q |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   |   |   |
|
|   |
|   |   |   |   |   |
|
|
|   |   |
|
|   |
|   |   |
|
|   |   |   |   |   |
Template Sequence |   |
V | R | I | G | I | G | I | A | Q | G | L | A | L | G | A | E | L | P | M | I | G | V | S | T | L | M | T | M | A | Q | G | A | W | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|