Job Description P45425 Confidence 71.99% Date Thu Jan 5 12:02:38 GMT 2012 Rank 165 Aligned Residues 270 % Identity 13% Template c3qbwA_ PDB info PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of pseudomonas aeruginosa 1,6-anhydro-n-2 actetylmuramic acid kinase (anmk) bound to adenosine diphosphate Resolution 2.23 Å

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		2	.	.	.	.	.	.	.			10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.																									.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure										.	.																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	L	A	I	D	I	G	.	.	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	.	.	R	D	R	R	E	L	P	T	P	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q
Query Conservation										.	.																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	L	G	L	M	S	G	T	S	L	D	G	M	D	I	V	L	I	E	Q	G	D	R	T	T	L	L	A	S	H	Y	L	P	M	P	A	G	L	R	E	D	I	L	A	L	C	V	P	G	P	D	E	I	A	R	A	A	E	V	E	Q	R	W	V	A	L	A	A	Q	G	V	R	E	L	L	L	Q	Q	Q
Template Known Secondary structure										T	T		S										S	S	S																							S	S			T	T																											T	T
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.										.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.
Query Sequence		A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	.	.	.	.	.	.	.	.	.	T	D	M
Query Conservation																																																																						.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																																				.	.											.	.								.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.																																				.	.											.	.
Template Sequence		M	S	P	D	E	V	R	.	.	.	.	.	A	I	G	S	H	G	Q	T	I	R	H	E	P	A	R	H	F	T	V	Q	I	G	N	P	A	L	L	A	E	L	T	G	I	D	V	.	.	V	A	D	F	R	R	R	D	V	A	.	.	A	G	G	Q	G	A	P	L	V	P	A	F	H	Q	A	L	F	S	R
Template Known Secondary structure				G	G	G			.	.	.	.	.													G	G	G	T																S	S			.	.											.	.	T	T							T
Template Predicted Secondary structure									.	.	.	.	.																																				.	.											.	.
Template SS confidence
		83	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.
Predicted Secondary structure																																.	.	.																			.	.																								.	.
Query SS confidence																																.	.	.																			.	.																								.	.
Query Sequence		V	F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	.	.	.	G	H	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	.	.	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	G	A	D	.	.	A	K
Query Conservation																																.	.	.																			.	.																								.	.
Alig confidence																																.	.	.																			.	.																								.	.
Template Conservation
Template Sequence		A	V	L	N	I	G	G	F	S	N	V	S	L	L	R	G	F	D	C	G	P	G	N	V	L	M	D	A	W	I	H	H	Q	R	G	E	H	F	D	R	D	G	A	W	A	A	S	G	Q	V	N	H	A	L	L	A	S	L	L	A	D	E	F	F	A	A	R	G	P	K	S	T	G	R	E	R	F	N	L	P
Template Known Secondary structure							S	S															S	S												S		S	S		G	G	G					T	S												T	S							S	S					T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	I	F	T	R	A	G	Q	G	.	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	D	C	Q	C	V	V	V	G	G	S	V	G	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D
Query Conservation											.
Alig confidence											.																																						.														.	.	.	.	.
Template Conservation																																																	.														.	.	.	.	.
Template Sequence		W	L	Q	E	H	L	A	R	H	P	A	L	P	A	A	D	I	Q	A	T	L	L	E	L	S	A	R	S	I	S	E	S	L	L	D	A	Q	P	D	V	L	V	C	G	G	G	A	.	F	N	T	A	L	M	K	R	L	A	M	L	M	.	.	.	.	.	P	E	A	R	V	A	S	T	D	E	Y	G	I	P
Template Known Secondary structure								T	S	S																																			S	G	G	G	.	G													.	.	.	.	.	T	T	S					G	G	G	G	T	S
Template Predicted Secondary structure																																																	.														.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.	.	.	.	.
		277	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	L	G	A	A	L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	W	M	E	G	M	A	F	A
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions