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Job DescriptionP45425
Confidence99.00%DateThu Jan 5 12:02:38 GMT 2012
Rank56Aligned Residues267
% Identity17%Templatec3p4iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetate kinase; PDBTitle: crystal structure of acetate kinase from mycobacterium avium
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10......... 20.........30.........40.........50.........60.........70.........
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Query Sequence  MTTLAIDIGGTKLAAALIG. ADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHN
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Template Sequence  RRVLVINSGSSSLKFQLVDPESGVAASTGIVERIESSPVPDHDAALRRAFDMLAGDGVDLNTAGLVAVGHRVVHGGNTFY
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S

STT

TTTTTS

TTT

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   910.........20.........30.........40.........50.........60.........70.........80........
 
   80.........90.. .......100.........
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Query Sequence  LGGLLHFPLVKTL. . . . . . . . . . . . . . . . . . . . . . EQLTNLPTIAINDAQAA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RPTVLDDAVIARLHELSELAPLHNPPALLGIEVARRLLPGIAHVAVFDTGFFHDLPPAAATYAIDRELADRWQIRRYGFH
Template Known Secondary structure  S


GGGTTT
TTT
TTSTTGGGTT



SS
T
S


S
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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   110.........120.........130.........140.........150.. .......160.........170.........
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Query Sequence  . . . . . . . . . AWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAG. HIGHTLADPHGPVCGCGRTGCVEAIAS
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Template Sequence  GTSHRYVSEQAAAFLDRPLRGLKQIVLHLGNGCSASAIAGTRPLDTSMGLTPLEGLVMGTRSGDIDPSVVSYLCHTAGMG
Template Known Secondary structure  TS
GGG
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S

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   171........180.........190.........200.........210.........220.........230.........240.........250
 
   180.........190.. .......200.........210.........220.........230.. .......240.... .....250.
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Query Sequence  GRGIAAAAQGELA. . . . . . GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATT. DCQCVVVGGSVG. LAEGYLA
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Template Sequence  VDDVESMLNHRSGVVGLSGVRDFRRLRELIESGDGAAQLAYSVFTHRLRKYIGAYLAVLGHTDVISFTAGIGENDAAVRR
Template Known Secondary structure  S
S


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   251........260.........270.........280.........290.........300.........310.........320.........330
 
   252.......260.......
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Query Sequence  LVETYLAQEPAAFHVD
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Template Sequence  DAVSGMEELGIVLDER
Template Known Secondary structure  TT
GGGT

B
TT
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   331........340......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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