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Job DescriptionP45425
Confidence99.20%DateThu Jan 5 12:02:38 GMT 2012
Rank52Aligned Residues236
% Identity13%Templatec3h1qB_
PDB info PDB header:structural proteinChain: B: PDB Molecule:ethanolamine utilization protein eutj; PDBTitle: crystal structure of ethanolamine utilization protein eutj from2 carboxydothermus hydrogenoformans
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30...... ...40.........50.........60.........70.......
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Query Sequence  TLAIDIGGTKLAAALIGADGQIRDRRELPTPASQ. . . . . TPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNP
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Template Sequence  KVGVDLGTADIVLVVTDQEGIPVAGALKWASVVKDGLVVDYIGAIQIVRELKAKVERLLGSELF. . . . . . . . . QAATAIP
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TT




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   27..30.........40.........50.........60.........70.........80.........90 .......
 
   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  HNLGGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHT
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Template Sequence  PGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARAL. . . . . . GINDGIVVDIGGGTTGIAVIEKGKITATFDEPTGGTHL
Template Known Secondary structure  TT

GGGGGTT
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T
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   98.100.........110.........120.........130... ......140.........150.........160.........170.
 
   158.160.........170.........180.........190.........200.........210.........220.........230.... ..
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Query Sequence  LADPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAGADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDC. QC
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . SLVLAGSYKIPFEEAETIKKDFSRHREIXRVVRPVIEKXALIVKEVIKNYDQTLP
Template Known Secondary structure  .........................T


T
GGGTS
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   172.......180.........190.........200.........210.........220......
 
   237..240.........250.........260.........270.........280.....
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Query Sequence  VVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALL
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Template Sequence  VYVVGGTAYLTGFSEEFSRFL. . . . . . . GKEVQVPIHPLLVTPLGIALF
Template Known Secondary structure  SGGGGSTT.......SS

B

SSGGGTT
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   227..230.........240....... ..250.........260........
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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