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Job DescriptionP45425
Confidence100.00%DateThu Jan 5 12:02:38 GMT 2012
Rank11Aligned Residues268
% Identity27%Templatec3eo3B_
PDB info PDB header:isomerase, transferaseChain: B: PDB Molecule:bifunctional udp-n-acetylglucosamine 2-epimerase/n- PDBTitle: crystal structure of the n-acetylmannosamine kinase domain of human2 gne protein
Resolution2.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPEALRDALSALVSPLQAHAQRVAIASTGIIRDGSLLALNPHNL
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Template Sequence  LSALAVDLGGTNLRVAIVSMKGEIVKKYTQFN. . PKTYEERINLILQMCVEAAAEAVKLNCRILGV. . . . . . . . . . . . . .
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   407..410.........420.........430........ .440.........450.........460.........470
 
   81........90.........100.........110......... 120.........130.........140.........150.........
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Query Sequence  GGLLHFPLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG. DITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLA
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Template Sequence  . . GISTDLRTPLSDTLHLPVWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVV
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   471........480.........490.........500.........510.........520.........530.........540........
 
   160.........170.........180.........190... ......200.........210.........220.........
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Query Sequence  DPHGPVCGCGRTGCVEAIASGRGIAAAAQGELAG. . . . . . . . . . ADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIK
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Template Sequence  SLDGPDCSCGSHGCIEAYASGMALQREAKKLHDEDLLLVEGMSAVGALHLIQAAKLGNAKAQSILRTAGTALGLGVVNIL
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   573......580.........590.........600.........610.........620.........630.........640.........650..
 
   230.........240.........250.........260.... .....270.........280.........
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Query Sequence  ATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAF. . HVDLLAAHYRHDAGLLGAALLAQGE
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Template Sequence  HTMNPSLVILSGVLA. . SHYIHIVKDVIRQQALSSVQDVDVVVSDL. VDPALLGAASMVLDY
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   658.660.........670.. .......680.........690.........700. ........710......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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