Job Description P45425 Confidence 100.00% Date Thu Jan 5 12:02:38 GMT 2012 Rank 10 Aligned Residues 279 % Identity 23% Template c2gupA_ PDB info PDB header:transferase Chain: A: PDB Molecule:rok family protein; PDBTitle: structural genomics, the crystal structure of a rok family protein2 from streptococcus pneumoniae tigr4 in complex with sucrose Resolution 2.01 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L
Query Conservation
Alig confidence																																				.	.																.	.
Template Conservation																																				.	.																.	.
Template Sequence		X	T	I	A	T	I	D	I	G	G	T	G	I	K	F	A	S	L	T	P	D	G	K	I	L	D	K	T	S	I	S	T	P	E	.	.	N	L	E	D	L	L	A	W	L	D	Q	R	L	S	E	.	.	Q	D	Y	S	G	I	A	X	S	V	P	G	A	V	N	Q	E	T	G	V	I	D	G	F	S	A	V
Template Known Secondary structure											T	T									T	T													S	.	.	S													T	T	.	.	S			S							S	S				T	T	T		B			S			S	S
Template Predicted Secondary structure																																				.	.																.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D
Query Conservation
Alig confidence															.																										.
Template Conservation															.																										.
Template Sequence		P	Y	I	H	G	F	S	W	Y	E	A	L	S	.	S	Y	Q	L	P	V	H	L	E	N	D	A	N	C	V	G	L	S	E	L	L	A	H	P	E	.	L	E	N	A	A	C	V	V	I	G	T	G	I	G	G	A	X	I	I	N	G	R	L	H	R	G	R	H	G	L	G	G	E	F	G	Y	X	T	T	L
Template Known Secondary structure		G	G	G	S	S	S	B					T	G	.	G	G																						T	T	.		S	S							S	S	S								T	T						T	T	S		T	T		G	G	G		B	S	S
Template Predicted Secondary structure															.																										.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190			.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	.	.	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	D	C	Q	C	V	V
Query Conservation																																.	.
Alig confidence		.	.	.	.	.																										.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	A	P	A	E	K	L	N	N	W	S	Q	L	A	S	T	G	N	X	V	R	Y	V	I	E	K	S	G	H	T	D	W	D	G	R	K	I	Y	Q	E	A	A	A	G	N	I	L	C	Q	E	A	I	E	R	X	N	R	N	L	A	Q	G	L	L	N	I	Q	Y	L	I	D	P	G	V	I	S
Template Known Secondary structure		.	.	.	.	.			S	S	S			B						S													S	S														T	T																													S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.						.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		V	G	G	S	V	G	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	.	.	.	.	.	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A	Q	G	E	K
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.
Template Conservation
Template Sequence		L	G	G	S	I	S	Q	N	P	D	F	I	Q	G	V	K	K	A	V	E	D	F	V	D	A	Y	E	E	Y	T	V	A	P	V	I	Q	A	C	T	Y	H	A	D	A	N	L	Y	G	A	L	V	N	W	L	Q	E	E
Template Known Secondary structure				S	G	G	G	G																				T	T			S								S		S	T	T														T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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