Job Description P45425 Confidence 100.00% Date Thu Jan 5 12:02:38 GMT 2012 Rank 18 Aligned Residues 277 % Identity 17% Template c2ch5D_ PDB info PDB header:transferase Chain: D: PDB Molecule:nagk protein; PDBTitle: crystal structure of human n-acetylglucosamine kinase in2 complex with n-acetylglucosamine Resolution 1.9 Å

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		1	.			.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure				.	.																																			.	.
Query SS confidence				.	.																																			.	.
Query Sequence		M	T	.	.	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N
Query Conservation				.	.																																			.	.
Alig confidence				.	.																																			.	.																														.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.
Template Sequence		M	A	A	I	Y	G	G	V	E	G	G	G	T	R	S	E	V	L	L	V	S	E	D	G	K	I	L	A	E	A	D	G	L	S	T	N	H	W	L	I	G	T	D	K	C	V	E	R	I	N	E	M	V	N	R	A	K	R	K	A	G	V	D	P	L	V	P	L	R	.	.	.	.	.	S	L	G	L	S	L
Template Known Secondary structure		T	S										T	T									T	T	S																																					T			T	T			B	S	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																								.	.	.																						.	.	.
Query SS confidence																								.	.	.																						.	.	.
Query Sequence		P	H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	L	.	.	.	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	.	.	.	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L
Query Conservation																								.	.	.																						.	.	.
Alig confidence																								.	.	.																						.	.	.
Template Conservation
Template Sequence		S	G	G	D	Q	E	D	A	G	R	I	L	I	E	E	L	R	D	R	F	P	Y	L	S	E	S	Y	L	I	T	T	D	A	A	G	S	I	A	T	A	T	P	D	G	G	V	V	L	I	S	G	T	G	S	N	C	R	L	I	N	P	D	G	S	E	S	G	C	G	G	W	G	H	M	M	G	D	E	G	S
Template Known Secondary structure		T	T	T	T																	T	T	S	B	S																	S	S								S	S	S								T	T	S										T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.																					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	H	I	G	H	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.
Template Sequence		A	Y	W	I	A	H	Q	A	V	.	.	.	.	K	I	V	F	D	S	I	D	N	L	E	A	A	P	H	D	I	G	Y	V	K	Q	A	M	F	H	Y	F	Q	V	P	D	R	L	G	I	L	T	H	L	Y	R	D	F	D	K	C	R	F	A	G	F	C	R	K	I	A	E	G	A	Q	Q	G	D	P	L	S
Template Known Secondary structure											.	.	.	.									T	S	S			S	S														T		S	S									T	T	T								T	T										T	T
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.					.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.									.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.									.
Query SS confidence																												.	.	.	.	.	.	.	.									.
Query Sequence		Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	D	C	Q	C	.	.	.	.	.	.	.	.	V	V	V	G	G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G
Query Conservation																												.	.	.	.	.	.	.	.									.
Alig confidence																												.	.	.	.	.	.	.	.									.																						.	.
Template Conservation																																																																		.	.
Template Sequence		R	Y	I	F	R	K	A	G	E	M	L	G	R	H	I	V	A	V	L	P	E	I	D	P	V	L	F	Q	G	K	I	G	L	P	I	L	C	V	G	S	V	W	K	S	W	E	L	L	K	E	G	F	L	L	A	L	T	Q	G	R	E	I	F	S	.	.	S	F	T	L	M	K	L	R	H	S	S	A	L	G
Template Known Secondary structure																				G	G	G	S		G	G	G	G		S	S	S								S	G	G	G	G	G																					.	.								S	S		T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.
		282	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	L	A	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	S	L	G	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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