Job Description P45425 Confidence 99.77% Date Thu Jan 5 12:02:38 GMT 2012 Rank 38 Aligned Residues 260 % Identity 15% Template c1zxoB_ PDB info PDB header:unknown function Chain: B: PDB Molecule:conserved hypothetical protein q8a1p1; PDBTitle: x-ray crystal structure of protein q8a1p1 from bacteroides2 thetaiotaomicron. northeast structural genomics consortium3 target btr25. Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																				.	.
Query SS confidence																																				.																				.	.
Query Sequence		T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	.	.	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N
Query Conservation																																				.																				.	.
Alig confidence																																				.																				.	.												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	A	D	S	G	S	T	K	T	D	W	C	V	V	L	N	G	A	V	I	K	R	L	G	T	K	G	I	N	P	F	F	Q	S	E	E	E	I	Q	Q	K	L	T	A	S	L	L	P	Q	L	P	E	G	K	F	N	A	V	Y	F	Y	G	A	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	T								S	S	S	S												T	T	T	S											T	T	T	G	G	G	S		S	S										T	T		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																				.	.																																						.	.	.	.
Query SS confidence																				.	.																																						.	.	.	.
Query Sequence		L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	.	.	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	.	.	.	.	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H
Query Conservation																				.	.																																						.	.	.	.
Alig confidence		.																		.	.																																						.	.	.	.
Template Conservation		.
Template Sequence		.	T	P	E	K	A	P	V	L	R	R	A	I	A	D	S	L	P	V	I	G	N	I	K	A	N	S	D	X	L	A	A	A	H	G	L	C	G	Q	K	A	G	I	A	C	I	L	G	T	G	S	N	S	C	F	Y	N	G	K	E	I	V	S	N	I	S	P	L	G	F	I	L	G	D	E	G	S	G	A	V
Template Known Secondary structure		.		T	T	T												S																					T	T	S								S	S	S								S	S	S															T	T	S
Template Predicted Secondary structure		.
Template SS confidence
			69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.	.	.	.				.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure											.																.	.	.																.	.	.	.
Query SS confidence											.																.	.	.																.	.	.	.
Query Sequence		I	G	H	T	L	A	D	P	H	.	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	.	.	.	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	.	.	.	.	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I
Query Conservation											.																.	.	.																.	.	.	.
Alig confidence											.																.	.	.																.	.	.	.										.	.
Template Conservation																																																										.	.
Template Sequence		L	G	K	L	L	V	G	D	I	L	K	N	Q	L	P	A	T	L	K	E	E	F	L	K	Q	F	D	L	T	P	P	E	I	I	D	R	V	Y	R	Q	P	F	P	N	R	F	L	A	S	L	S	P	F	I	A	Q	.	.	H	L	E	E	P	A	I	R	Q	L	V	X	N	S	F	I	A	F	F	R	R	N
Template Known Secondary structure											T	T	T		S													T												T	S	S									T						T	.	.	T	T	T	S																		T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	I	K	A	T	T	D	C	Q	C	V	V	V	G	G	S	V	G	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A	Q	G
Query Conservation
Alig confidence						.																	.	.																							.	.	.	.	.	.	.
Template Conservation						.																	.	.																							.	.	.	.	.	.	.
Template Sequence		V	X	Q	Y	.	D	Y	K	Q	Y	P	V	H	F	I	G	S	I	A	Y	C	.	.	Y	K	E	I	L	Q	D	A	A	R	Q	T	G	I	Q	I	G	K	I	L	Q	S	.	.	.	.	.	.	.	P	X	E	G	L	I	Q	Y	H	S	Q
Template Known Secondary structure		G	G	G	S	.		G	G	G	S						S						.	.	T											T	T								S		.	.	.	.	.	.	.	T	T									T
Template Predicted Secondary structure						.																	.	.																							.	.	.	.	.	.	.
Template SS confidence
		226	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions