Job Description P45425 Confidence 99.81% Date Thu Jan 5 12:02:38 GMT 2012 Rank 32 Aligned Residues 260 % Identity 15% Template c1zbsA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pg1100; PDBTitle: crystal structure of the putative n-acetylglucosamine kinase (pg1100)2 from porphyromonas gingivalis, northeast structural genomics target3 pgr18 Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																		.	.	.	.
Query SS confidence																																				.																		.	.	.	.
Query Sequence		T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	.	.	.	.	A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P
Query Conservation																																				.																		.	.	.	.
Alig confidence																																				.																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	G	D	S	G	S	T	K	T	D	W	C	I	A	K	E	G	K	S	L	G	R	F	Q	T	S	G	I	N	P	F	Q	Q	D	R	N	E	I	D	T	A	L	R	S	E	V	L	P	A	I	G	Q	K	A	S	S	I	R	A	V	Y	F	Y	G	A	G	C	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	S									T	T													T	T	T	S										T	T	T	T					T	T	S	T	T	T									T	T		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																						.	.																																								.	.	.	.
Query SS confidence																						.	.																																								.	.	.	.
Query Sequence		H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	.	.	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	.	.	.	.	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A
Query Conservation																						.	.																																								.	.	.	.
Alig confidence		.	.	.																		.	.																																								.	.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	T	P	A	K	A	P	X	L	N	E	A	L	D	S	X	L	P	H	C	D	R	I	E	V	A	G	D	X	L	G	A	A	R	A	L	C	G	D	S	E	G	I	A	C	I	L	G	T	G	S	N	S	C	L	F	D	G	R	E	I	K	A	N	V	S	P	L	G	Y	I	L	G	D	E	G	S	G
Template Known Secondary structure		.	.	.		T	T	T												S	T	T		S																T	T	T	S								S	S	S								S	S	S															T	T	S
Template Predicted Secondary structure		.	.	.
Template SS confidence
					71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		152	.	.	.	.								.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.																															.
Query SS confidence							.	.	.	.	.	.	.																															.
Query Sequence		G	H	I	G	H	.	.	.	.	.	.	.	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	.	A	Q	G	E	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R
Query Conservation							.	.	.	.	.	.	.																															.
Alig confidence							.	.	.	.	.	.	.																															.																	.	.																		.	.
Template Conservation																																																													.	.																		.	.
Template Sequence		A	V	L	G	R	L	F	I	G	S	L	L	K	G	Q	X	P	E	G	L	C	E	A	F	L	Q	E	Y	G	L	T	S	A	D	I	I	E	S	V	Y	R	K	P	F	P	N	R	F	L	A	G	F	S	P	F	I	A	Q	H	.	.	L	D	I	P	A	V	Y	S	L	V	Q	N	S	F	D	D	F	.	.
Template Known Secondary structure														T	T		S		T	T									T	T													S	S								T	T						T	T	.	.	T	T	S															.	.
Template Predicted Secondary structure																																																													.	.																		.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		L	I	A	D	I	K	A	T	T	D	C	Q	.	.	C	V	V	V	G	G	S	V	G	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A	Q	G	E	K
Query Conservation														.	.
Alig confidence		.												.	.										.	.																									.	.	.	.	.	.	.
Template Conservation		.																							.	.																									.	.	.	.	.	.	.
Template Sequence		.	L	V	R	N	V	L	R	Y	N	R	P	D	L	P	L	H	F	I	G	S	V	A	.	.	F	H	Y	R	E	V	L	S	S	V	I	K	K	R	G	L	T	L	G	S	V	L	Q	S	.	.	.	.	.	.	.	P	X	E	G	L	I	Q	Y	H	H	N	N	H
Template Known Secondary structure		.					T	G	G	G			T	T	S						S				.	.			T											T	T								S		.	.	.	.	.	.	.	S
Template Predicted Secondary structure		.																							.	.																									.	.	.	.	.	.	.
Template SS confidence
			224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.								270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions