Job Description P45425 Confidence 98.66% Date Thu Jan 5 12:02:38 GMT 2012 Rank 60 Aligned Residues 258 % Identity 16% Template c1x3nA_ PDB info PDB header:transferase Chain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.																		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure																					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	.	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	A	Q	R	V	A	I	A
Query Conservation																					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	V	L	V	I	N	C	G	S	S	S	I	K	F	S	V	L	D	V	A	T	C	D	V	L	M	A	G	I	A	D	G	M	N	T	E	N	A	F	L	S	I	N	G	D	K	P	I	N	L	A	H	S	N	Y	E	D	A	L	K	A	I	A	F	E	L	E	K	R	D	L	T	D	S	V	A	L	I	G
Template Known Secondary structure											S	S									T	T	T											S	T	T	S	S	S					S	T	T	S						S	S																T	T	T		T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		63	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	.	.	.	.	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L	G	G	L	L	H	F	P	L	V	.	.	.	.	.	.	.	.	.	.	.	.	K	T	L	E	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	R	I	A	H	G	G	E	L	F	T	Q	S	V	I	I	T	D	E	I	I	D	N	I	R	R	V	S	P	L	A	P	L	H	N	Y	A	N	L	S	G	I	D	A	A	R	H	L	F	P	A	V	R	Q	V	A	V	F	D	T	S	F	H	Q	T	L	A	P	E	A	Y	L	Y	G	L	P	W	E	Y	F
Template Known Secondary structure					S			T	T	T		S	S																G	G	G	S																			T	T	S							T	T	G	G	G	G	G									S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	.	H	I	G	H	T	L	A	D	P	H	G	P	V	C	G	C
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		S	S	L	G	V	R	R	Y	G	F	H	G	T	S	H	R	Y	V	S	R	R	A	Y	E	L	L	D	L	D	E	K	D	S	G	L	I	V	A	H	L	G	N	G	A	S	I	C	A	V	R	N	G	Q	S	V	D	T	S	M	G	M	T	P	L	E	G	L	M	M	G	T	R	S	G	D	V	D	F	G	A
Template Known Secondary structure			T	T							S																T	T		B	T	T	B									S	S	S								T	T						S			S	S	T	T	S	S	S			S	S				S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240
Predicted Secondary structure																								.	.	.	.	.	.	.																																											.
Query SS confidence																								.	.	.	.	.	.	.																																											.
Query Sequence		G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	.	.	.	.	.	.	.	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	.	D	C	Q	C	V	V	V	G
Query Conservation																								.	.	.	.	.	.	.																																											.
Alig confidence																								.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		M	A	W	I	A	K	E	T	G	Q	T	L	S	D	L	E	R	V	V	N	K	E	S	G	L	L	G	I	S	G	L	S	S	D	L	R	V	L	E	K	A	W	H	E	G	H	E	R	A	R	L	A	I	K	T	F	V	H	R	I	A	R	H	I	A	G	H	A	A	S	L	H	R	L	D	G	I	I	F	T
Template Known Secondary structure										T													S								S	S		S											T	T																								T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		241	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		G	G	I	G	E	N	S	V	L	I	R	Q	L	V	I	E	H	L	G
Template Known Secondary structure																		T	T	G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions