Job Description P45425 Confidence 99.64% Date Thu Jan 5 12:02:38 GMT 2012 Rank 45 Aligned Residues 279 % Identity 17% Template c1v4sA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucokinase isoform 2; PDBTitle: crystal structure of human glucokinase Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		T	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	.	.	.	.	.	.	.	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	.	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	.	.	.	.	.	.	.	.	A	Q	R	V	A	I	A	S
Query Conservation																							.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.															.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	L	S	L	D	L	G	G	T	N	F	R	V	M	L	V	K	V	G	E	G	E	E	G	Q	W	S	V	K	T	K	H	Q	M	Y	S	I	P	E	D	A	M	T	G	T	A	E	M	L	F	D	Y	I	S	E	C	I	S	D	F	L	D	K	H	Q	M	K	H	K	K	L	P	L	G	F	T	F	S	F
Template Known Secondary structure									S	S	S													S	S	S															S	T	T	T	S	S	B																		T	T	T		T	T											S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		64	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure								.																			.	.	.	.	.	.	.														.	.	.
Query SS confidence								.																			.	.	.	.	.	.	.														.	.	.
Query Sequence		T	G	I	I	R	D	.	G	S	L	L	A	L	N	P	H	N	L	G	G	L	L	H	F	P	.	.	.	.	.	.	.	L	V	K	T	L	E	Q	L	T	N	L	P	T	.	.	.	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G
Query Conservation								.																			.	.	.	.	.	.	.														.	.	.
Alig confidence								.																			.	.	.	.	.	.	.														.	.	.																	.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		P	V	R	H	E	D	I	D	K	G	I	L	L	N	W	T	K	G	F	K	A	S	G	A	E	G	N	N	V	V	G	L	L	R	D	A	I	K	R	R	G	D	F	E	M	D	V	V	A	M	V	N	D	T	V	A	T	M	I	S	C	Y	Y	E	.	.	.	D	H	Q	C	E	V	G	M	I	V	G	T	G
Template Known Secondary structure								T	T									T	T				B	T		T	T	S	B										T	T	T		S																					T	T	.	.	.		T	T								S	S	S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.													.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																											.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																											.	.	.	.	.	.
Query Sequence		V	G	G	G	V	V	S	G	C	K	.	.	.	.	.	.	.	.	.	.	.	.	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D	P	H	.	.	.	.	.	.	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	.	.	.	.	.	.
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																											.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																											.	.	.	.	.	.
Template Conservation
Template Sequence		C	N	A	C	Y	M	E	E	M	Q	N	V	E	L	V	E	G	D	E	G	R	M	C	V	N	T	E	W	G	A	F	G	D	S	G	E	L	D	E	F	L	L	E	Y	D	R	L	V	D	E	S	S	A	N	P	G	Q	Q	L	Y	E	K	L	I	G	G	K	Y	M	G	E	L	V	R	L	V	L	L	R	L
Template Known Secondary structure										G	G	G		T	T	S	S			S	S								G	G	G	T	T	T	T	S	T	T	T	T	T											T	S	S	S	T	T	S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
																	189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																										.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	E	N	L	L	F	H	G	E	A	S	E	Q	L	R	T	R	G	A	F	E	T	R	F	V	S	Q	V	E	S	D	T	G	D	R	K	Q	I	Y	N	I	L	S	T	L	G	L	R	P	S	T	T	D	C	D	I	V	R	R	A	C	E	S	V	S	T	R	A	A	H	M	C	S	A	G	L	A	G	V
Template Known Secondary structure				T	T		S	G	G	G				T	G	G	G	S	T	T		S									T	T			S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.									.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.										.
Query SS confidence									.	.	.	.	.	.	.	.										.
Query Sequence		K	A	T	T	D	C	Q	.	.	.	.	.	.	.	.	C	V	V	V	G	G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A
Query Conservation									.	.	.	.	.	.	.	.										.
Alig confidence									.	.	.	.	.	.	.	.										.																												.	.	.
Template Conservation																																																						.	.	.
Template Sequence		I	N	R	M	R	E	S	R	S	E	D	V	M	R	I	T	V	G	V	D	G	S	V	Y	K	L	H	P	S	F	K	E	R	F	H	A	S	V	R	R	L	T	P	S	C	E	I	T	F	I	E	S	.	.	.	E	E	G	S	G	R	G	A	A	L	V	S
Template Known Secondary structure							T	T			S	S	S															S	T	T														T	T									.	.	.	S	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.	.	450	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions