Job Description P45425 Confidence 97.62% Date Thu Jan 5 12:02:38 GMT 2012 Rank 93 Aligned Residues 270 % Identity 14% Template c1o1f4_ PDB info PDB header:contractile protein Chain: 4: PDB Molecule:skeletal muscle actin; PDBTitle: molecular models of averaged rigor crossbridges from2 tomograms of insect flight muscle Resolution 70.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																																						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P	T	P	A	S	Q	T	P	E	A	L	R	D	A	L
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	V	C	D	N	G	S	G	L	V	K	A	G	F	A	G	D	D	A	P	R	A	V	F	P	S	I	V	G	R	P	R	H	Q	G	V	M	V	G	M	G	Q	K	D	S	Y	V	G	D	E	A	Q	S	K	R	G	I	L	T	L	K	Y	P	I	E	H	G	I	I	T	N	W	D	D	M	E	K	I	W
Template Known Secondary structure									S	S							T	T		S	S		S											S	S					T	T					S				T						T	G	G	G						S			T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	V	S	P	L	Q	A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Sequence		H	H	T	F	Y	N	E	L	R	V	A	P	E	E	H	P	.	.	.	.	.	.	.	.	.	T	L	L	T	E	A	P	L	N	P	K	A	N	R	E	K	M	T	Q	I	M	F	E	T	F	N	V	P	A	M	Y	V	A	I	Q	A	V	L	S	L	Y	A	.	.	.	.	.	S	G	R	T	T	G	I	V
Template Known Secondary structure							T	T	T				G	G	G	S		.	.	.	.	.	.	.	.	.							T	T																	T			S															.	.	.	.	.	T	S		S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	S	G	D	G	V	T	H	N	V	P	I	Y	E	G	Y	A	L	P	H	A	I	M	R	L	D	L	A	G	R	D	L	T	D	Y	L	M	K	I	L	T	E	R	G	Y	S	F	V	T	T	A	E	R	E	I	V	R	D	I	K	E	K	L	C	Y	V	A	L	D	F	E	N	E	M	A	T	A	A	S
Template Known Secondary structure						S	S									T	T				G	G	G																					T	T	T					S																			S	S	S
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
		206	.	.	.	210	.																											.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.								.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		G	D	E	Q	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	D	C	Q	C	.	.	.	.	.	.	.	V	V	V	G	G	S	V	G	L	A	E	G	Y	L	A	L
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	S	S	L	E	K	S	Y	E	L	P	D	G	Q	V	I	T	I	G	N	E	R	F	R	C	P	E	T	L	F	Q	P	S	F	I	G	M	E	S	A	G	I	H	E	T	T	Y	N	S	I	M	K	C	D	I	D	I	R	K	D	L	Y	A	N	N	V	M	S	G	G	T	T	M	Y	P	G	I	A	D	R
Template Known Secondary structure				T	T							S	S	S						S	S					T	T						G	G	G	G	T			S												T	T	S		T	T	T						T						S	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
		253	.	.	.	.	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		V	E	T	Y	L	A	Q	E	P	A	.	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A
Query Conservation												.
Alig confidence												.
Template Conservation
Template Sequence		M	Q	K	E	I	T	A	L	A	P	S	T	M	K	I	K	I	I	A	P	P	E	R	K	Y	S	V	W	I	G	G	S	I	L	A
Template Known Secondary structure								T	T	S		T	T	S								T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions