Job Description P45425 Confidence 98.38% Date Thu Jan 5 12:02:38 GMT 2012 Rank 64 Aligned Residues 253 % Identity 12% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.																																		.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	T	.	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	E	A	L	R	D	A	L	S
Query Conservation				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	K	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	T	V	A	L	V	M	L	R
Template Known Secondary structure			S									S	S							T	T	T								S						T	T	T							S					T	T	T	T	S			T	T									T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	S	P	L	Q	A	H	A	Q	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	.	.	.	.	.	.	.	.	.	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	L	N	V	E	E	P	S	G	N	M	V	V
Template Known Secondary structure									T	S			S	S			.	.	.	.	.	.	.	.	.								S	S															T	T	T		S														T	T	T			S	S	S	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.										.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	G	A	D	A	K	T	I	F	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	G	G	G	T	T	E	V	A	V	I	S	L	G	S	I	V	T	W	E	S	I	R	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	M	D	E	A	I	V	Q	Y	V	R	E	T	Y	R	V	A	I	G	E	R	T	A	E	R	V	K	I	E	I	G	N	V
Template Known Secondary structure					S	S									T	T									S		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.																				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
																																	201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K	A	T	T	D	C	Q	C	V	V	V	G	G	S	V	G	L	A	E	G	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	P	S	K	E	N	D	E	L	E	T	T	V	S	G	I	D	L	S	T	G	L	P	R	K	L	T	L	K	G	G	E	V	R	E	A	L	R	S	V	V	V	A	I	V	E	S	V	R	T	T	L	E	K	T	P	P	E	L	V	S	D	I	I	E	R	G	I	F	L	T	G	G	G	S	L	L	R	G	L
Template Known Secondary structure		S							T										T	T	T	T																																	T	S																	S	G	G	G		S	B	T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A	Q	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		D	T	L	L	Q	K	E	T	.	.	.	.	.	.	.	G	I	S	V	I	R	S	E	E	P	L	T	A	V	A	K	G	A	G	M	V	L	D	K
Template Known Secondary structure										.	.	.	.	.	.	.		S						S	S	S	T	T									T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		294	.	.	.	.	.	300	.								.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions