Job Description P45425 Confidence 99.60% Date Thu Jan 5 12:02:38 GMT 2012 Rank 46 Aligned Residues 279 % Identity 20% Template c1ig8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:hexokinase pii; PDBTitle: crystal structure of yeast hexokinase pii with the correct2 amino acid sequence Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.											.	.	.	.	60	.	.	.	.
Predicted Secondary structure																								.	.	.														.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.														.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Query Sequence		T	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	.	.	.	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	.	.	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	.	.	.	.	.	.	.	.	.	.	A	Q	R	V	A	I	A	S	T
Query Conservation																								.	.	.														.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.														.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	L	A	I	D	L	G	G	T	N	L	R	V	V	L	V	K	L	G	G	D	R	T	F	D	T	T	Q	S	K	Y	R	L	P	D	A	M	R	T	T	Q	N	P	D	E	L	W	E	F	I	A	D	S	L	K	A	F	I	D	E	Q	F	P	Q	G	I	S	E	P	I	P	L	G	F	T	F	S	F	P
Template Known Secondary structure										S	S											S	S	S													T	T	G	G	G		S		T																				T	T				S										S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		65	.	.	.	.		70	.	.	.	.	.	.	.	.				.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure							.										.	.	.																			.	.	.					.	.	.
Query SS confidence							.										.	.	.																			.	.	.					.	.	.
Query Sequence		G	I	I	R	D	.	G	S	L	L	A	L	N	P	H	.	.	.	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	.	.	.	N	L	P	T	.	.	.	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G
Query Conservation							.										.	.	.																			.	.	.					.	.	.
Alig confidence							.										.	.	.																			.	.	.					.	.	.																	.	.	.
Template Conservation																																																																.	.	.
Template Sequence		A	S	Q	N	K	I	N	E	G	I	L	Q	R	W	T	K	G	F	D	I	P	N	I	E	N	H	D	V	V	P	M	L	Q	K	Q	I	T	K	R	N	I	P	I	E	V	V	A	L	I	N	D	T	T	G	T	L	V	A	S	Y	Y	T	.	.	.	D	P	E	T	K	M	G	V	I	F	G	T	G	V	N
Template Known Secondary structure					S	B	T	T									T	T				T	T		T	T	S	B												T	T																							.	.	.		T	T								S	S	S
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		135	.	.																									.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Query Sequence		G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation
Template Sequence		G	A	Y	Y	D	V	C	S	D	I	E	K	L	Q	G	K	L	S	D	D	I	P	P	S	A	P	M	A	I	N	C	E	Y	G	S	F	D	N	E	H	V	V	L	P	R	T	K	Y	D	I	T	I	D	E	E	S	P	R	P	G	Q	Q	T	F	E	K	M	S	S	G	Y	Y	L	G	E	I	L	R	L	A
Template Known Secondary structure								G	G	G		G	G	G	T	T		S		T	T	S		T	T									G	G	G	T	T	T	T		S	S	S													S	S	S	T	T	S	S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
																					189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.																												.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	D	M	Y	K	Q	G	F	I	F	K	N	Q	D	L	S	K	F	D	K	P	F	V	M	D	T	S	Y	P	A	R	I	E	E	D	P	F	E	N	L	E	D	T	D	D	L	F	Q	N	E	F	G	I	N	T	T	V	Q	E	R	K	L	I	R	R	L	S	E	L	I	G	A	R	A	A	R	L	S	V
Template Known Secondary structure								T	T	S	S	S	T	T				T	T	T	S	S	T	T	S	S		T											S	T	T																																								T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																				.	.					.																	.	.	.	.	.	.	.
Query SS confidence																				.	.					.																	.	.	.	.	.	.	.
Query Sequence		R	L	I	A	D	I	K	A	T	T	D	C	Q	C	V	V	V	G	.	.	G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	.	.	.	.	.	.	.	P	A	A	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A
Query Conservation																				.	.					.																	.	.	.	.	.	.	.
Alig confidence																				.	.					.																	.	.	.	.	.	.	.															.	.	.
Template Conservation																																																																.	.	.
Template Sequence		C	G	I	A	A	I	C	Q	K	R	G	Y	K	T	G	H	I	A	A	D	G	S	V	Y	N	R	Y	P	G	F	K	E	K	A	A	N	A	L	K	D	I	Y	G	W	T	Q	T	S	L	D	D	Y	P	I	K	I	V	P	A	E	D	G	.	.	.	S	G	A	G	A	A	V	I	A
Template Known Secondary structure												T		S	S							S						S	T	T														T					S	G	G	G		S									T	.	.	.	T	T
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.				460	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions