Job Description P45425 Confidence 99.65% Date Thu Jan 5 12:02:38 GMT 2012 Rank 44 Aligned Residues 276 % Identity 17% Template c1bdgA_ PDB info PDB header:hexokinase Chain: A: PDB Molecule:hexokinase; PDBTitle: hexokinase from schistosoma mansoni complexed with glucose Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.														.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.														.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		T	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	A	D	G	Q	.	.	.	I	R	D	R	R	E	L	P	T	P	A	S	Q	.	.	.	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H	.	.	.	.	.	.	.	.	A	Q	R	V	A	I	A	S	T	G	I	I
Query Conservation																								.	.	.														.	.	.																				.	.	.	.	.	.	.	.
Alig confidence																								.	.	.														.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	F	L	A	L	D	L	G	G	T	N	Y	R	V	L	S	V	T	L	E	G	G	K	S	P	R	I	Q	E	R	T	Y	C	I	P	A	E	K	M	S	G	S	G	T	E	L	F	K	Y	I	A	E	T	L	A	D	F	L	E	N	N	G	M	K	D	K	K	F	D	L	G	F	T	F	S	F	P	C	V	Q
Template Known Secondary structure									S	S	S	S																									T	T	T	T	T	S	B																			T	T			S	S										S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.					.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.							.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																						.	.	.	.	.	.
Query SS confidence											.	.	.	.																						.	.	.	.	.	.
Query Sequence		R	D	G	S	L	L	A	L	N	.	.	.	.	P	H	N	L	G	G	L	L	H	F	P	L	V	K	T	L	E	Q	L	T	N	.	.	.	.	.	.	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	V
Query Conservation											.	.	.	.																						.	.	.	.	.	.
Alig confidence											.	.	.	.																						.	.	.	.	.	.																				.	.	.
Template Conservation																																																													.	.	.
Template Sequence		K	G	L	T	H	A	T	L	V	R	W	T	K	G	F	S	A	D	G	V	E	G	H	N	V	A	E	L	L	Q	T	E	L	D	K	R	E	L	N	V	K	C	V	A	V	V	N	D	T	V	G	T	L	A	S	C	A	L	E	.	.	.	D	P	K	C	A	V	G	L	I	V	G	T	G	T	N	V	A	Y
Template Known Secondary structure			T	T	T									T	T				B	T		T	T	S	B											T	T	T																					T	T	.	.	.		T	T								S	S	S
Template Predicted Secondary structure																																																													.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		138	.	140														.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T	L	A	D	P	H	.	.	.	.	.	.	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	A	S	G	R	G	I	A	A	A	A	Q	.	.	.	.	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	D	S	S	K	V	E	L	M	D	G	V	K	E	P	E	V	V	I	N	T	E	W	G	A	F	G	E	K	G	E	L	D	C	W	R	T	Q	F	D	K	S	M	D	I	D	S	L	H	P	G	K	Q	L	Y	E	K	M	V	S	G	M	Y	L	G	E	L	V	R	H	I	I	V	Y	L	V	E	Q	K
Template Known Secondary structure					T	T	T		G	G	G		S		S	S	S								G	G	G	T	T	T	T	S	T	T	T	T	T											T	S	S	S	T	T	S		T	T					S																		T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
																																												189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	A	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																												.	.	.
Template Sequence		I	L	F	R	G	D	L	P	E	R	L	K	V	R	N	S	L	L	T	R	Y	L	T	D	V	E	R	D	P	A	H	L	L	Y	N	T	H	Y	M	L	T	D	D	L	H	V	P	V	V	E	P	I	D	N	R	I	V	R	.	.	.	Y	A	C	E	M	V	V	K	R	A	A	Y	L	A	G	A	G	I	A
Template Known Secondary structure		S	S	G	G	G				S	G	G	G	S	T	T		S		T	T						T	T			T	T												T	S			S	S											.	.	.
Template Predicted Secondary structure																																																												.	.	.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.				.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.		.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																.	.					.																				.
Query SS confidence																.	.					.																				.
Query Sequence		D	I	K	A	T	T	D	C	Q	C	V	V	V	G	.	.	G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E	P	A	A	.	F	H	V	D	L	L	A	A	H	Y	R	H	D	A	G	L	L	G	A	A	L	L	A
Query Conservation																.	.					.																				.
Alig confidence																.	.					.																				.									.	.	.
Template Conservation																																																			.	.	.
Template Sequence		C	I	L	R	R	I	N	R	S	E	V	T	V	G	V	D	G	S	L	Y	K	F	H	P	K	F	C	E	R	M	T	D	M	V	D	K	L	K	P	K	N	T	R	F	C	L	R	L	S	.	.	.	E	D	G	S	G	K	G	A	A	A	I	A
Template Known Secondary structure										S								S							T	T													S		T	T									.	.	.	T	T
Template Predicted Secondary structure																																																			.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440				.	.	.	.	.	.	.	.	.	450	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions