Job Description P0AAC0 Confidence 94.89% Date Thu Jan 5 11:12:30 GMT 2012 Rank 20 Aligned Residues 246 % Identity 10% Template c3g40A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:na-k-cl cotransporter; PDBTitle: crystal structure of the cytoplasmic domain of a2 prokaryotic cation chloride cotransporter Resolution 1.90 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	L	V	V	I	D	P	N	Q	D	D	Q	P	A	L	R	R	A	V	Y	L	H	Q	R	I	G	G	K	I	K	A	F	L	P	I	Y	D	F	S	Y	E	M	T	T	L	L	S	P	D	E	R	T	A	M	R	Q	G	V	I	S	Q	R	T	A	W	I	H	E	Q	A	K	Y	Y	L	N	A	G	V	P
Query Conservation
Alig confidence																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	L	L	V	P	V	E	D	P	R	E	L	M	G	T	F	D	F	L	R	D	I	T	Y	P	K	G	.	.	.	.	S	V	K	L	L	G	L	A	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	L	L	S	Q	L	P	S	I	S	E	G	F	Q	E	E	G	V	F
Template Known Secondary structure								S																	T	T	T		.	.	.	.										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																T	T
Template Predicted Secondary structure																													.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.					.	.	.	.	.	.	.	.	530	.																				.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160					.
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		I	E	I	K	V	V	W	H	N	R	P	F	E	A	I	I	Q	E	V	I	S	G	G	H	D	L	V	L	K	M	A	H	Q	H	D	R	L	E	A	V	I	F	T	P	T	D	W	H	L	L	R	K	C	P	S	P	V	W	M	V	K	D	Q	P	W	P	E	G	G	K	A	L	V	A	V	.	.	.	.	N
Query Conservation																																																																													.	.	.	.
Alig confidence																																																																													.	.	.	.
Template Conservation
Template Sequence		S	S	W	T	I	I	E	E	N	L	V	V	G	M	E	A	L	T	G	S	F	F	R	P	S	I	L	F	L	R	L	P	E	N	R	D	R	D	E	E	I	R	E	I	I	R	K	A	S	M	Y	R	M	G	V	L	L	F	S	K	H	P	Q	A	G	L	G	R	Q	N	L	I	N	L	W	I	E	N	R	W
Template Known Secondary structure																			T	T		S	S		S									S	S	G	G	G														T	T										T	T	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	E	E	P	Y	H	N	A	L	N	E	K	L	V	K	E	T	I	E	L	A	E	Q	V	N	H	T	E	V	H	L	V	G	A	Y	P	V	T	P	I	N	I	A	I	E	L	P	E	F	D	P	S	V	Y	N	D	A	I	R	G	Q	H	L	L	A	M	K	A	L	R	Q	K	F	G	I	N	E	N
Query Conservation
Alig confidence														.	.	.													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	I	S	M	E	L	G	N	M	D	L	A	.	.	.	L	L	I	A	Y	K	L	K	S	N	W	K	.	A	S	L	S	F	M	T	F	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	I	Q	A	Q	A	A	E	N	F	L	Q	S	L	A	E	L	A	R	I	P	N	V
Template Known Secondary structure					S				T	T				.	.	.												T	.										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																			T			S
Template Predicted Secondary structure														.	.	.													.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		643	.	.	.	.	.	.	650	.	.	.	.				.	.	.	.	.	660	.	.	.	.	.	.		.	.	.	670	.	.	.	.	.	.																			.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	H	V	E	K	G	L	P	E	E	V	I	P	D	L	A	E	H	L	Q	A	G	I	V	V	L	G	T	V	G	R	T	G	I	S	A	A	F	L	G	N	T	A	E	Q	V	I	D	H	L	R	C	D	L	L	V	I	K	P	D	Q	Y	Q	T
Query Conservation
Alig confidence														.	.	.	.																						.	.	.	.	.	.
Template Conservation														.	.	.	.																						.	.	.	.	.	.
Template Sequence		K	M	Q	V	L	R	E	N	P	I	K	S	.	.	.	.	S	K	L	P	F	A	S	L	H	I	F	S	L	D	P	N	P	D	L	D	L	.	.	.	.	.	.	A	R	H	L	M	E	K	A	G	S	S	C	I	F	A	L	D	S	G	E	E	N
Template Known Secondary structure							S	S		T	T	T	S	.	.	.	.	S	S					S								S	S						.	.	.	.	.	.									T	S									S
Template Predicted Secondary structure														.	.	.	.																						.	.	.	.	.	.
Template SS confidence
		701	.	.	.	.	.	.	.	.	710	.	.					.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.							.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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