Job Description P0AAC0 Confidence 53.01% Date Thu Jan 5 11:12:30 GMT 2012 Rank 53 Aligned Residues 89 % Identity 9% Template c3fy4C_ PDB info PDB header:lyase Chain: C: PDB Molecule:6-4 photolyase; PDBTitle: (6-4) photolyase crystal structure Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	Y	L	H	Q	R	I	G	G	K	I	K	A	F	L	P	I	Y	D	F	S	Y	E	M	T	T	L	L	S	P	D	E	R	T	A	M	R	Q	G	V	I	S	Q	R	T	A	W	I	H	E	Q	A	K	Y	Y	L	N	A	G	V	P	I	E	I	K	V	V	W	H	N	R	P	F	E	A	I	I	Q
Query Conservation
Alig confidence																																																																		.	.	.
Template Conservation																																																																		.	.	.
Template Sequence		P	A	L	E	Y	A	S	K	G	S	E	F	M	Y	P	V	F	V	I	D	P	H	Y	M	E	S	D	P	S	A	F	S	P	G	S	S	R	A	G	V	N	R	I	R	F	L	L	E	S	L	K	D	L	D	S	S	L	K	K	L	G	S	R	L	.	.	.	L	V	F	K	G	E	P	G	E	V	L	V	R
Template Known Secondary structure									T	T		S														S			T	T	S	S	S	S	B		S	S		B																					T	T				.	.	.					S
Template Predicted Secondary structure																																																																		.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	I	S	G	G	H	D	L	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	L	Q	E	W	K	V	K	R	L	C	F
Template Known Secondary structure							T		S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions