Job Description P0AAC0 Confidence 29.48% Date Thu Jan 5 11:12:30 GMT 2012 Rank 97 Aligned Residues 91 % Identity 10% Template c3cvyA_ PDB info PDB header:lyase/dna Chain: A: PDB Molecule:re11660p; PDBTitle: drosophila melanogaster (6-4) photolyase bound to repaired2 ds dna Resolution 2.70 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		D	P	N	Q	D	D	Q	P	A	L	R	R	A	V	Y	L	H	Q	R	I	G	G	K	.	.	I	K	A	F	L	P	I	Y	D	F	S	Y	E	M	T	T	L	L	S	P	D	E	R	T	A	M	R	Q	G	V	I	S	Q	R	T	A	W	I	H	E	Q	A	K	Y	Y	L	N	A	G	V	P	I	E	I	K
Query Conservation																									.	.
Alig confidence																									.	.																			.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.																										.	.	.
Template Sequence		G	L	R	L	H	D	N	P	A	L	S	H	I	F	T	A	A	N	A	A	P	G	R	Y	F	V	R	P	I	F	I	L	D	P	G	I	L	D	W	M	Q	V	G	.	.	.	.	.	.	.	.	.	A	N	R	W	R	F	L	Q	Q	T	L	E	D	L	D	N	Q	L	R	K	L	N	S	R	L	.	.	.
Template Known Secondary structure					S	T	T														S	T	T	S											T	T	T	T	T	T	S				.	.	.	.	.	.	.	.	.																					T	T				.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.																										.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	W	H	N	R	P	F	E	A	I	I	Q	E	V	I	S	G	G	H	D	L	V	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	V	R	G	K	P	A	E	V	F	P	R	I	F	K	S	W	R	V	E	M	L	T	F
Template Known Secondary structure						S														T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions