Job Description P0AAC0 Confidence 24.29% Date Thu Jan 5 11:12:30 GMT 2012 Rank 114 Aligned Residues 107 % Identity 14% Template c2hmaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable trna (5-methylaminomethyl-2-thiouridylate)- PDBTitle: the crystal structure of trna (5-methylaminomethyl-2-thiouridylate)-2 methyltransferase trmu from streptococcus pneumoniae Resolution 2.41 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.											.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	M	L	V	V	I	D	P	N	Q	D	D	Q	P	A	L	R	R	A	V	Y	L	H	Q	R	I	G	G	K	I	K	A	F	L	P	I	Y	D	F	S	Y	E	M	T	T	L	L	S	P	D	E	R	T	A	M	R	Q	G	V	.	.	.	.	.	.	.	.	.	.	I	S	Q	R	T	A	W	I	H	E
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.																																							.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		T	R	V	V	V	G	X	S	G	G	V	D	S	S	V	T	A	L	.	.	.	.	L	L	K	E	Q	G	Y	D	V	I	G	I	F	X	K	N	W	D	D	T	D	C	T	A	T	E	D	Y	K	D	V	V	A	V	A	D	Q	I	G	I	P	Y	Y	S	V	N	F	E	K	E	Y	W	D	R	V	F	E	Y
Template Known Secondary structure		S								S	S									.	.	.	.					T	T																																	T																T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	K	Y	Y	L	N	A	G	V	P	I	E	I	K	V	V	W	H	N	R	P	F	E	A	I	I	Q	E	V	I	S	G	G	H	D	L	V	L	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	A	E	Y	R	A	G	R	T	P	N	P	D	V	X	C	N	K	E	I	K	F	K	A	F	L	D	Y	A	I	T	L	G	A	D	Y	V	A	T	G
Template Known Secondary structure								T	T													T	T	T	T								T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions