|   |
313 | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | |
. | . | . | . | |
|
|
|
|
|
|
|
. | . | . | . | 380 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . |
|
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | M | E | K | V | S | A | G | Y | G | D | R | I | I | L | D | S | I | K | L | N | L | V | P | G | S | R | I | G | L | L | G | R | N | G | A | G | K | S | T | L | I | K | L | L | A | G | E | L | A | P | V | S | G | E | I | G | L | . |
A | K | G | I | . |
. |
. |
. |
. |
. |
. |
. |
K | L | G | Y | F | A | Q | H |
Query Conservation |   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |
|   |
|   |   | . |
|   |   |   | . | . | . | . | . | . | . | . |   |
|   |
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
V | K | L | E | N | L | T | K | R | F | G | N | F | T | A | V | N | K | L | N | L | T | I | K | D | G | E | F | L | V | L | L | G | P | S | G | C | G | K | T | T | T | L | R | M | I | A | G | L | E | E | P | T | E | G | R | I | Y | F | G | D | R | D | V | T | Y | L | P | P | K | D | R | N | I | S | M | V | F | Q | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  | T | S | S |
|
| S |  |  |  |  |  |  | T | T |  |  |
| T | T | S |
| G | G | G | G | T |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |
|
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . |
  |
  |   |
384 | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
|
|
|
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | E | Y | L | R | A | D | E | S | P | I | Q | H | L | A | . |
. |
. |
. |
R | L | A | P | Q | E | L | E | Q | K | L | R | D | Y | L | G | G | F | G | F | Q | G | D | K | V | T | E | E | T | R | R | F | S | G | G | E | K | A | R | L | V | L | A | L | I | V | W | Q | R | P | N | L | L | L | L | D | E | P | T | N |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |
|
|   |   |   |
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   | . |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
M | T | V | Y | E | N | I | A | F | P | L | K | K | F | P | K | D | E | I | D | K | R | V | R | W | A | A | E | L | L | Q | I | E | . |
E | L | L | N | R | Y | P | A | Q | L | S | G | G | Q | R | Q | R | V | A | V | A | R | A | I | V | V | E | P | D | V | L | L | M | D | E | P | L | S |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | . | G | G | T | T | S |
| T | T | T |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | S | T | T | T |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . |
  |
  |   |
460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | |
|
|
|
. | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | L | D | L | D | M | R | Q | A | L | T | E | A | L | I | E | F | . |
. |
. |
. |
E | G | A | L | V | V | V | S | H | D | R | H | L | L | R | S | T | T | D | D | L | Y | L | V | H | D | R | K | V | E | P | F | D | G | D | L | E | D | Y | Q | Q |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   | . | . | . | . |   |
|
|
|
|   |
|
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|   |   | . |   |
|   |   |   |
|
|   |   |
Template Sequence |   |
N | L | D | A | K | L | R | V | A | M | R | A | E | I | K | K | L | Q | Q | K | L | K | V | T | T | I | Y | V | T | H | D | Q | V | E | A | M | T | M | G | D | R | I | A | V | M | N | R | G | Q | L | L | Q | . |
I | G | S | P | T | E | V | Y | L |
Template Known Secondary structure |   |
T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | T |  |  |  |  | . |  |  |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  | . |  |
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | . | . | 230 | . | . |
  |