Return to main results Retrieve Phyre Job Id

Job DescriptionP63389
Confidence96.71%DateThu Jan 5 12:08:08 GMT 2012
Rank194Aligned Residues220
% Identity20%Templated1qvra2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   341........350.........360.........370.........380.........390.........400.........410.........420
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Query Sequence  IGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQ
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Template Sequence  PVLIGEPGVGKTAIVEGLA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QRIVKGDVP
Template Known Secondary structure 

TTS
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S
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   194.....200.........210.. .......220.
 
   421........430.........440.........450 .........460.........470.........480.........490.......
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Query Sequence  GDKVTEETRRFSGGEKARLVLALIVWQRPN. . . LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDL
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Template Conservation                                   





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Template Sequence  EGLKGKRIVSLQMEFEERLKAVIQEVVQSQGEVILFIDE. . . . . . . . . . . . LKPALARGELRLIGATTLDEYREIEKDPA
Template Known Secondary structure  TTSTT



TT
SS

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TT
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   222.......230.........240.........250.........260 .........270.........280.........
 
   498.500.........510.........520.........530... ......540.........550.........560
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Query Sequence  YLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAP. . . . . . . . . . . . . . . . . KENANSAQARKDQKRREAELRAQTQPL
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Template Conservation 
      
 
          

                  

                   
  
               
Template Sequence  LERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESA
Template Known Secondary structure  T
S







TT



SS
TTTTT
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   320.........330.........340.........350.........360.........370.........380.........390.........
 
   561........570.........580.........590.........600.........610.........620.........630
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Query Sequence  RKEIARLEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQEQLEQM
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Template Conservation                           ......              
  
   
                 
Template Sequence  PEEIDALERKKLQLEIEREALKKEK. . . . . . DPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKL
Template Known Secondary structure  SS
S......SS
T
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   400.........410.........420.... .....430.........440.........450.........460...
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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