Return to main results Retrieve Phyre Job Id

Job DescriptionP63389
Confidence99.78%DateThu Jan 5 12:08:08 GMT 2012
Rank63Aligned Residues168
% Identity13%Templatec3tauB_
PDB info PDB header:transferaseChain: B: PDB Molecule:guanylate kinase; PDBTitle: crystal structure of a putative guanylate monophosphaste kinase from2 listeria monocytogenes egd-e
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   337..340.........350.........360.........370...... ...380.........390........ .400.
Predicted Secondary structure 



















.........








......
Query SS confidence 







































. . . . . . . . .





















. . . . . .


Query Sequence  PGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIK. . . . . . . . . LGYFAQHQLEYLRADESPIQHL. . . . . . ARL
Query Conservation   

   


 

 






 
 
      
 
  
    .........
 
  
     
    

   
......   
Alig confidence 

























.












.........






..












......


Template Conservation 

 

 
 
 







   
    .          
                  ..   
                  
Template Sequence  RGLLIVLSGPSGVGKGTVREAVFKDP. ETSFDYSISXTTRLPREGEQDGVDYYFRS. . REVFEQAIKDGKXLEYAEYVGN
Template Known Secondary structure 



STTSSST.T





SS


TT

BTTTB

..TT
TT
Template Predicted Secondary structure 








.













..







Template SS confidence 















































































   4.....10.........20......... 30.........40.........50........ .60.........70.........80
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  APQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEFEGALV
Query Conservation              
             
  





 

 

 

   
 







  

      
   
    



Alig confidence 









..........



























































Template Conservation          
 ..........         
  
                 
 



             

         
Template Sequence  YYGTPLEYVE. . . . . . . . . . EKLAAGVDIFLEIEVQGAXQVRKAXPEGIFIFLTPPDLSEEERXETAKKEIEXXASYDYA
Template Known Secondary structure  ..........TT




TTS
GGGT

TTSS
Template Predicted Secondary structure 
..........


















Template SS confidence 















































































   81........90 .........100.........110.........120.........130.........140.........150
 
   482.......490.........500.........510.......
Predicted Secondary structure 








Query SS confidence 



































Query Sequence  VVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQ
Query Conservation   



   
   
  
  
  
 
    
    
  
Alig confidence 



































Template Conservation 

  

  
      

  
  
           

Template Sequence  VVNDVVANAVQKIKGIVETEHLKTERVIHRYKKXLE
Template Known Secondary structure 
SST

Template Predicted Secondary structure 






Template SS confidence 



































   167..170.........180.........190.........200..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions