Job Description P63389 Confidence 100.00% Date Thu Jan 5 12:08:08 GMT 2012 Rank 18 Aligned Residues 212 % Identity 27% Template c3gfoA_ PDB info PDB header:atp binding protein Chain: A: PDB Molecule:cobalt import atp-binding protein cbio 1; PDBTitle: structure of cbio1 from clostridium perfringens: part of2 the abc transporter complex cbionq. Resolution 2.30 Å

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		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.
Predicted Secondary structure																	.																																																.					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.																																																.					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	L	L	K	M	E	K	V	S	A	G	Y	G	D	.	R	I	I	L	D	S	I	K	L	N	L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	I	K	L	L	A	G	E	L	A	P	V	S	G	E	I	G	L	.	A	K	G	I	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																	.																																																.					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.																																																.					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	I	L	K	V	E	E	L	N	Y	N	Y	S	D	G	T	H	A	L	K	G	I	N	M	N	I	K	R	G	E	V	T	A	I	L	G	G	N	G	V	G	K	S	T	L	F	Q	N	F	N	G	I	L	K	P	S	S	G	R	I	L	F	D	N	K	P	I	D	Y	S	R	K	G	I	M	K	L	R	E
Template Known Secondary structure															T	T	S													T	T	S								T	T	S	S									T	T	S	S			S							T	T						S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.							.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		K	L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	.	.	.	.	.	.	A	R	L	A	P	Q	E	L	E	Q	K	L	R	D	Y	L	G	G	F	G	F	Q	G	D	K	V	T	E	E	T	R	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W	Q	R	P
Query Conservation																									.	.	.	.	.	.
Alig confidence											.														.	.	.	.	.	.																							.
Template Conservation											.																																										.
Template Sequence		S	I	G	I	V	F	Q	D	P	.	D	N	Q	L	F	S	A	S	V	Y	Q	D	V	S	F	G	A	V	N	M	K	L	P	E	D	E	I	R	K	R	V	D	N	A	L	K	R	T	G	I	E	.	H	L	K	D	K	P	T	H	C	L	S	F	G	Q	K	K	R	V	A	I	A	G	V	L	V	M	E	P
Template Known Secondary structure		S						S	S	G	.	G	G	T			S	S	B											T	S																		T	T		G	.	G	G	T	T	S	B	G	G	G	S															T	T
Template Predicted Secondary structure											.																																										.
Template SS confidence
		83	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		N	L	L	L	L	D	E	P	T	N	H	L	D	L	D	M	R	Q	A	L	T	E	A	L	I	E	F	.	.	.	.	E	G	A	L	V	V	V	S	H	D	R	H	L	L	R	S	T	T	D	D	L	Y	L	V	H	D	R	K	V	E	P	F	D	G	D	L	E	D	Y	Q	Q	W	L	S	D	V	Q	K
Query Conservation																													.	.	.	.
Alig confidence																													.	.	.	.																																.
Template Conservation																																																																.
Template Sequence		K	V	L	I	L	D	E	P	T	A	G	L	D	P	M	G	V	S	E	I	M	K	L	L	V	E	M	Q	K	E	L	G	I	T	I	I	I	A	T	H	D	I	D	I	V	P	L	Y	C	D	N	V	F	V	M	K	E	G	R	V	I	L	.	Q	G	N	P	K	E	V	F	A	E	K	E	V	I	R	K
Template Known Secondary structure		S							T	T	T	T																													S			S	S	G	G	G	G		S							T	T					.								T
Template Predicted Secondary structure																																																																.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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