Return to main results Retrieve Phyre Job Id

Job DescriptionP63389
Confidence100.00%DateThu Jan 5 12:08:08 GMT 2012
Rank15Aligned Residues201
% Identity29%Templatec3fvqB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:fe(3+) ions import atp-binding protein fbpc; PDBTitle: crystal structure of the nucleotide binding domain fbpc2 complexed with atp
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330.........340.........350.........360.........370. .... ....
Predicted Secondary structure 





















.



............
Query SS confidence 


























































.



. . . . . . . . . . . .



Query Sequence  LKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGL. AKGI. . . . . . . . . . . . KLGY
Query Conservation 
    
   
     
  
   
  

   


 

 






 
 
      
 
  .
   ............ 
 
Alig confidence 


























































.



............



Template Conservation 
 
  
   
     
  


 
  

   


 








  
 
      
 
   
  
             
  
Template Sequence  LHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGY
Template Known Secondary structure  TT
TT
STTSSTSS

STTTT

GGG


Template Predicted Secondary structure 





































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   380.........390.........400 .........410.........420.........430.........440.........450...
Predicted Secondary structure 








......













Query SS confidence 




















. . . . . .




















































Query Sequence  FAQHQLEYLRADESPIQHLAR. . . . . . LAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLL
Query Conservation    
     
    

   
  ......             
             
  





 

 

 

   
 


Alig confidence 



..














......



















.































Template Conservation      ..        
                         
    
 .         




 


 




   
 


Template Sequence  LVQE. . GVLFPHLTVYRNIAYGLGNGKGRTAQERQRIEAMLELTGIS. ELAGRYPHELSGGQQQRAALARALAPDPELIL
Template Known Secondary structure 
TT..



TTS
TTSTTSS

ST
G.GGTT

GGGS
TT

S
Template Predicted Secondary structure 



..
























.













Template SS confidence 















































































   85... .90.........100.........110.........120......... 130.........140.........150.........160.
 
   454.....460.........470...... ...480.........490.........500.........510.......
Predicted Secondary structure 







....











Query SS confidence 






















. . . .








































Query Sequence  LDEPTNHLDLDMRQALTEALIEF. . . . EGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQ
Query Conservation 




  

      
   
   .... 



 



   
   
  
  
  
 
    
    
  
Alig confidence 






















....






























.








Template Conservation 





 

      
   
  
    
 


 


   
     
 
 

  
 
  . 
   

  
Template Sequence  LDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQ. TASPHELYR
Template Known Secondary structure  STTTTS
TT




STT.
Template Predicted Secondary structure 















.

Template SS confidence 



































































   162.......170.........180.........190.........200.........210......... 220........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions