Job Description P63389 Confidence 97.19% Date Thu Jan 5 12:08:08 GMT 2012 Rank 125 Aligned Residues 148 % Identity 20% Template c2zjbB_ PDB info PDB header:recombination Chain: B: PDB Molecule:meiotic recombination protein dmc1/lim15 homolog; PDBTitle: crystal structure of the human dmc1-m200v polymorphic2 variant Resolution 3.50 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	.	I	K	L	L	A	G	E	L	A	P	V	S	G	E	I	G	L	A	K	G	I	K	L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	A	R	L	A	P	Q	E	L	E	Q	K	L	R	D	Y
Query Conservation																						.
Alig confidence																						.													.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	S	M	A	I	T	E	A	F	G	E	F	R	T	G	K	T	Q	L	S	H	T	L	C	V	T	A	Q	L	P	G	A	.	.	.	G	G	Y	P	G	G	K	I	I	F	I	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	T	F	R	P	D	R	L	R	D	I
Template Known Secondary structure				S	S	S								S	S		T												T	T	S		B	T	.	.	.	T	T	B										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																			.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.				.	150	.	.	.	.	.	.	.	.	.	160	.																				.	.	.	.	.	.	.	.	170	.	.	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.				430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.																	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	G	F	G	F	Q	G	D	K	V	T	E	E	T	R	.	.	.	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W	Q	.	.	.	.	.	R	P	N	L	L	L	L	D	E	P	T	N	H	L	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	R	Q	A	L
Query Conservation																		.	.	.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.																			.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	R	F	N	V	D	H	D	A	V	L	D	N	V	L	Y	A	R	A	Y	T	S	E	H	Q	V	E	L	L	D	Y	V	A	A	K	F	H	E	E	A	G	I	F	K	L	L	I	I	D	S	I	M	A	L	F	R	V	D	F	S	G	R	G	E	L	A	E	R	Q	Q	K	L	A	Q	M	L	S	R	L
Template Known Secondary structure		G	G	G	G	T							T	T	S								S	T	T																S		S	S									S	T							S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	A	L	I	E	F	E	G	A	L	V	V	V	S	H	D	R	H	L	L	R	S	T	T	D	D	L	Y	L	V	H	D	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	K	I	S	E	E	Y	N	V	A	V	F	V	T	N	Q	M	G	H	I	L	A	H	A	S	T	T	R	I	S	L	R	K	G	R
Template Known Secondary structure								T	T																S	S	S								S	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions