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Job DescriptionP63389
Confidence100.00%DateThu Jan 5 12:08:08 GMT 2012
Rank31Aligned Residues219
% Identity23%Templatec2nq2C_
PDB info PDB header:metal transportChain: C: PDB Molecule:hypothetical abc transporter atp-binding protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter.
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.. .......330.........340.........350.........360.........370.........380........
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Query Sequence  NPLLKMEKVSAGY. GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYL
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Template Sequence  NKALSVENLGFYYQAENFLFQQLNFDLNKGDILAVLGQNGCGKSTLLDLLLGIHRPIQGKIEVYQSI. . GFVPQF. . FSS
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TTTTTT


SSSSTTSS

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   2.......10.........20.........30.........40.........50.........60........ .70.... ...
 
   389390........ .400.........410.........420.........430.........440.........450........
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Query Sequence  RADESPIQHL. . . . . . . . . . ARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPT
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Template Sequence  PFAYSVLDIVLMGRSTHINTFAKPKSHDYQVAMQALDYLNLT. HLAKREFTSLSGGQRQLILIARAIASECKLILLDEPT
Template Known Secondary structure  SS

BGGGGGGS
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TT
G.GGTTSBGGGS
TT
SSSSS
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   78.80.........90.........100.........110......... 120.........130.........140.........150......
 
   459460.........470...... ...480.........490.........500.........510.........520.........530....
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Query Sequence  NHLDLDMRQALTEALIEF. . . . EGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQWLSDVQKQENQTDEAPK
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Template Sequence  SALDLANQDIVLSLLIDLAQSQNMTVVFTTHQPNQVVAIANKTLLLNKQNFK. F. GETRNILTSENLTALFHLPMFEQQA
Template Known Secondary structure  TTS
TS

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   157..160.........170.........180.........190.........200........ . 210.........220.........230....
 
   535
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Query Sequence  E
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Template Sequence  Q
Template Known Secondary structure 
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   235
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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