Job Description P63389 Confidence 100.00% Date Thu Jan 5 12:08:08 GMT 2012 Rank 27 Aligned Residues 235 % Identity 23% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		K	Q	A	Q	S	R	I	K	M	L	E	R	M	E	L	I	A	P	A	H	V	D	N	P	F	R	F	S	F	R	A	P	E	S	L	P	N	P	L	L	K	M	E	K	V	S	A	G	Y	G	D	.	.	R	I	I	L	D	S	I	K	L	N	L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K
Query Conservation																																																					.	.
Alig confidence																												.	.	.	.																						.	.
Template Conservation																												.	.	.	.
Template Sequence		T	Q	S	F	A	S	M	D	R	V	F	Q	L	I	D	E	D	Y	D	I	K	N	G	V	G	A	.	.	.	.	Q	P	I	E	I	K	Q	G	R	I	D	I	D	H	V	S	F	Q	Y	N	D	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K
Template Known Secondary structure																T				S	S				T	T		.	.	.	.							S												S		S	S	S			S										T	T								S	T	T	S	S
Template Predicted Secondary structure																												.	.	.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330					.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.												.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	T	L	I	K	L	L	A	G	E	L	A	P	V	S	G	E	I	G	L	A	K	G	I	.	.	.	.	.	.	.	.	.	.	.	K	L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	A	R	L	A	P	Q	E	L	E	Q	K	L	R	D	Y	L	G	G	F	G	F	Q
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.								.	.	.
Template Conservation																																												.	.	.
Template Sequence		S	T	L	I	N	L	I	P	R	F	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S	L	R	N	Q	I	G	L	V	Q	Q	.	.	.	D	N	I	L	F	S	D	T	V	K	E	N	I	L	L	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H
Template Known Secondary structure						T	T	T	T	T	S	S			S							T	T			G	G	G	S								T						S	.	.	.	S					S	S	B						G	G	G		S	S													T	T
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.				.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
								421	.	.	.	.	.	.	.	.					430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.			.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.										.	.	.	.																																																.	.
Query SS confidence		.	.	.	.	.	.										.	.	.	.																																																.	.
Query Sequence		.	.	.	.	.	.	G	D	K	V	T	E	E	T	R	.	.	.	.	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W	Q	R	P	N	L	L	L	L	D	E	P	T	N	H	L	D	L	D	M	R	Q	A	L	T	E	A	L	I	E	F	.	.	E	G	A	L	V	V	V	S	H	D	R	H
Query Conservation		.	.	.	.	.	.										.	.	.	.																																																.	.
Alig confidence		.	.	.	.	.	.										.	.	.	.																																																.	.
Template Conservation
Template Sequence		D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R	L	S	I	A	R	I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	S	K	D	R	T	T	L	I	V	A	H	R	L	S
Template Known Secondary structure						T	S	T	T	G	G	G		B			G	G	G	T	T	S																			S						S	T	T	T	T																	T	T	T	S							S	S	G	G
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	R	S	T	T	D	D	L	Y	L	V	H	D	R	K	V	E	P	F	D	G	D	L	E	D	Y	Q	Q
Query Conservation
Alig confidence					.																.
Template Conservation					.																.
Template Sequence		T	I	T	.	H	A	D	K	I	V	V	I	E	N	G	H	I	V	E	.	T	G	T	H	R	E	L	I	A
Template Known Secondary structure		G	T	T	.	T		S							T	T					.
Template Predicted Secondary structure					.																.
Template SS confidence
		538	.	540		.	.	.	.	.	.	.	.	.	550	.	.	.	.	.		.	.	.	.	560	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions