Job Description P63389 Confidence 96.58% Date Thu Jan 5 12:08:08 GMT 2012 Rank 223 Aligned Residues 148 % Identity 18% Template c2dflA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: crystal structure of left-handed rada filament Resolution 2.90 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.		.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	.	I	K	L	L	A	G	E	L	A	P	V	S	G	E	I	G	L	A	K	G	I	K	L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	A	R	L	A	P	Q	E	L	E	Q	K	L	R	D	Y
Query Conservation																						.
Alig confidence																						.													.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	T	R	T	M	T	E	F	F	G	E	F	G	S	G	K	T	Q	L	C	H	Q	L	S	V	N	V	Q	L	P	P	E	.	.	.	K	G	G	L	S	G	K	A	V	Y	I	D	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	F	R	W	E	R	I	E	N	M
Template Known Secondary structure		B		T	T	S							S	T	T	S	S	T	T										S	S	S		G	G	.	.	.	G	T	S		S								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																			.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.				.	.	.	140	.	.	.	.	.	.	.	.	.	150																				.	.	.	.	.	.	.	.	.	160	.
		414	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.								430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.											.	460	.	.	.	.	.	.	.	.							.	470
Predicted Secondary structure																		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		L	G	G	F	G	F	Q	G	D	K	V	T	E	E	T	R	.	.	.	.	.	.	.	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W	Q	R	P	N	L	L	L	L	D	E	P	T	.	.	.	.	.	.	.	.	.	.	N	H	L	D	L	D	M	R	Q	A	.	.	.	.	.	.	L	T
Query Conservation																		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	A	L	G	L	D	I	D	N	V	M	N	N	I	Y	Y	I	R	A	I	N	T	D	H	Q	I	A	I	V	D	D	L	Q	E	L	V	S	K	D	P	S	I	K	L	I	V	V	D	S	V	T	S	H	F	R	A	E	Y	P	G	R	E	N	L	A	V	R	Q	Q	K	L	N	K	H	L	H	Q	L	T
Template Known Secondary structure						T									T								S										T									T	T									T	T							S		T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	L	I	E	F	E	G	A	L	V	V	V	S	H	D	R	H	L	L	R	S	T	T	D	D	L	Y	L	V	H	D	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	A	E	V	Y	D	I	A	V	I	I	T	N	Q	V	M	H	T	L	Y	H	V	P	G	I	R	I	Q	L	K	K	S	R
Template Known Secondary structure						T	T	T															S	S		S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions