Job Description P63389 Confidence 100.00% Date Thu Jan 5 12:08:08 GMT 2012 Rank 41 Aligned Residues 208 % Identity 26% Template c2d2fA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:sufc protein; PDBTitle: crystal structure of atypical cytoplasmic abc-atpase sufc from thermus2 thermophilus hb8 Resolution 1.90 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.			.	.	.	.	.	.	370	.		.	.	.	.												.
Predicted Secondary structure																																																							.	.									.					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.									.					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	L	K	M	E	K	V	S	A	G	Y	G	D	R	I	I	L	D	S	I	K	L	N	L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	I	K	L	L	A	G	E	L	A	.	.	P	V	S	G	E	I	G	L	.	A	K	G	I	.	.	.	.	.	.	.	.	.	.	.	K
Query Conservation																																																							.	.									.					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.									.					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	L	E	I	R	D	L	W	A	S	I	D	G	E	T	I	L	K	G	V	N	L	V	V	P	K	G	E	V	H	A	L	M	G	P	N	G	A	G	K	S	T	L	G	K	I	L	A	G	D	P	E	Y	T	V	E	R	G	E	I	L	L	D	G	E	N	I	L	E	L	S	P	D	E	R	A	R	K	G
Template Known Secondary structure														T	T													T	T								S	S	S	S	S										T		T	T											T	T				T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.										400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																								.
Query SS confidence																									.	.	.	.	.	.	.	.	.																								.
Query Sequence		L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	A	.	.	.	.	.	.	.	.	.	R	L	A	P	Q	E	L	E	Q	K	L	R	D	Y	L	G	G	F	G	F	Q	G	D	.	K	V	T	E	E	T	R	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W
Query Conservation																									.	.	.	.	.	.	.	.	.																								.
Alig confidence									.	.															.	.	.	.	.	.	.	.	.																								.
Template Conservation									.	.
Template Sequence		L	F	L	A	F	Q	Y	.	.	P	V	E	V	P	G	V	T	I	A	N	F	L	R	L	A	L	Q	A	K	L	G	R	E	V	G	V	A	E	F	W	T	K	V	K	K	A	L	E	L	L	D	W	D	E	S	Y	L	S	R	Y	L	N	E	G	F	S	G	G	E	K	K	R	N	E	I	L	Q	L	L	V
Template Known Secondary structure		B							.	.		T	T			S		B														T	S																			T			G	G	G	G	G	S	B	T	T	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		82	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.				.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.		.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure																																.	.	.																		.
Query SS confidence																																.	.	.																		.
Query Sequence		Q	R	P	N	L	L	L	L	D	E	P	T	N	H	L	D	L	D	M	R	Q	A	L	T	E	A	L	I	E	F	.	.	.	E	G	A	L	V	V	V	S	H	D	R	H	L	L	R	S	T	.	T	D	D	L	Y	L	V	H	D	R	K	V	E	P	F	D	G	D	L	E	D	Y	Q	Q	W	L	S	D
Query Conservation																																.	.	.																		.
Alig confidence																																.	.	.																		.																.
Template Conservation																																																																				.
Template Sequence		L	E	P	T	Y	A	V	L	D	E	T	D	S	G	L	D	I	D	A	L	K	V	V	A	R	G	V	N	A	M	R	G	P	N	F	G	A	L	V	I	T	H	Y	Q	R	I	L	N	Y	I	Q	P	D	K	V	H	V	M	M	D	G	R	V	V	A	T	.	G	G	P	E	L	A	L	E	L	E	A	K
Template Known Secondary structure					S							G	G	G	T	T																	B	T	T	B							S	S	S	G	G	G	G	T	S			S							T	T						.		S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions