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Job DescriptionP63389
Confidence100.00%DateThu Jan 5 12:08:08 GMT 2012
Rank23Aligned Residues195
% Identity22%Templatec1vciA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   313......320.........330.........340.........350.........360.........370. .... ....380...
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Query Sequence  LKMEKVSAGYGDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGL. AKGI. . . . . . . . KLGYFAQH
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Template Sequence  VKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQH
Template Known Secondary structure  TT
TT


TTSSTSS

STT
TTS
GGGTT


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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   384.....390......... 400.........410.........420.........430.........440.........450.........
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Query Sequence  QLEYLRADESPIQHLA. . . . RLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPNLLLLDEPTN
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Template Sequence  . . . . . . . . MTVYENIAFPLKKFPKDEIDKRVRWAAELLQIE. ELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLS
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   99100.........110.........120.........130. ........140.........150.........160.........
 
   460.........470...... ...480.........490.........500.........510.......
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Query Sequence  HLDLDMRQALTEALIEF. . . . EGALVVVSHDRHLLRSTTDDLYLVHDRKVEPFDGDLEDYQQ
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Template Sequence  NLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQ. IGSPTEVYL
Template Known Secondary structure  TS


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   172.......180.........190.........200.........210.........220... ......230..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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