Job Description P63389 Confidence 96.74% Date Thu Jan 5 12:08:08 GMT 2012 Rank 187 Aligned Residues 143 % Identity 20% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.							360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.
Query Sequence		L	V	P	G	S	R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	I	K	L	L	A	.	.	.	.	.	.	G	E	L	A	P	V	S	G	E	I	G	L	A	K	G	I	K	L	G	Y	F	A	Q	H	Q	L	E	Y	L	R	A	D	E	S	P	I	Q	H	L	A	R	L	A	P	Q	E	L	E	Q
Query Conservation																											.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	E	T	G	S	I	T	E	L	F	G	E	F	R	T	G	K	S	Q	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	E	G	T	F	R	P	V
Template Known Secondary structure				S	S	S							S	T	T	S	S												T	T	S		T	T	T	T			S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S				G	G
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.																												.	220	.	.	.	.	.	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.							430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.										.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		K	L	R	D	Y	L	G	G	F	G	F	Q	G	D	K	V	T	E	E	T	R	.	.	.	.	.	.	R	F	S	G	G	E	K	A	R	L	V	L	A	L	I	V	W	Q	R	P	N	L	L	L	L	D	E	P	T	N	H	L	D	.	.	.	.	.	.	.	.	.	L	D	M	R	Q	A	L	T	E	A	L
Query Conservation																							.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	V	S	I	A	Q	R	F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R	L	A
Template Known Secondary structure		G	G							T								G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		474	.	.	.	.	.	480	.	.	.	.	.		.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		I	E	F	E	G	A	L	V	V	V	S	H	.	D	R	H	L	L	R	S	T	T	D	D	L	Y	L	V	H	D	R	K
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		D	Q	F	G	V	A	V	V	V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K	K	G	K
Template Known Secondary structure																								S									S
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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