Job Description P63389 Confidence 95.36% Date Thu Jan 5 12:08:08 GMT 2012 Rank 424 Aligned Residues 42 % Identity 29% Template c1f5nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: human guanylate binding protein-1 in complex with the gtp2 analogue, gmppnp. Resolution 1.70 Å

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		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.											.	.	.	.	.	.	.	370	.							.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Query Sequence		R	I	G	L	L	G	R	N	G	A	G	K	S	T	L	I	K	L	L	A	G	E	L	.	.	.	.	.	.	.	.	.	.	A	P	V	S	G	E	I	G	L	.	.	.	.	.	.	A	K	G	I	K	L	G	Y	F	A
Query Conservation																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	T	K	G	I	W	M	W	C	V	P	H	P	K	K	P	G	H	I	L	V	L	L	D
Template Known Secondary structure								B	T	T	S	S									T	T		S	S		S					S	S	S					S									S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions