Return to main results Retrieve Phyre Job Id

Job DescriptionP75796
Confidence100.00%DateThu Jan 5 12:14:14 GMT 2012
Rank46Aligned Residues242
% Identity29%Templatec3nhaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:atp-binding cassette sub-family b member 6, mitochondrial; PDBTitle: nucleotide binding domain of human abcb6 (adp mg bound structure)
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   292.......300.........310.........320.........330.........340.........350.........360.........370.
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  LEHPAKQAPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALL
Query Conservation                        
    
   
                
  

  
  

   
 
 









 
 
Alig confidence 































...........




































Template Conservation                        
    

  
...........     
  


 
  

   
 
 








  
 
Template Sequence  LKEETEVKDLPGAGPLRFQKGRIEFENVHFSY. . . . . . . . . . . ADRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLF
Template Known Secondary structure  T
SS





TT





SS


S...........



S
TT

STTSST
Template Predicted Secondary structure 



















...........














Template SS confidence 















































































   568.570.........580.........590......... 600.........610.........620.........630......
 
   372.......380.........390.........400.........410.........420.........430.........440.........450.
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  RLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLRVHGLLPGKDAAARVAWLLERVG
Query Conservation 
   
  
 
   
              
  
  
 
 
   
    

   
   
                  
   
Alig confidence 























...











...



















.
















Template Conservation 

     
 
   
          ...    
  
 
  ...     

 


         .                 
Template Sequence  RFYDISSGCIRIDGQDISQVTQAS. . . LRSHIGVVPQDT. . . VLFNDTIADNIRYGRVTAGN. DEVEAAAQAAGIHDAIM
Template Known Secondary structure  TSS

STTGGGS
...T
SS
...


STTSTT

.T
Template Predicted Secondary structure 














...





...








.
Template SS confidence 















































































   638.640.........650.........660. ........670... ......680.........690... ......700.........710
 
   452.......460.. .......470.........480.........490.........500.........510.........520.......
Predicted Secondary structure 




....

















Query SS confidence 










. . . .
































































Query Sequence  LLPEHAWRYPH. . . . EFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVV
Query Conservation 
          .... 








 




   
 







  

      
   
  
    
 


 



    
Alig confidence 










....
















































..













Template Conservation   
           
  

 
  


 




     








 

      
   
     ..  


 


    
Template Sequence  AFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCA. . NRTTIVVAHRLSTV
Template Known Secondary structure  TSTTGGG
STTSB




S

SS


T..TS

S
Template Predicted Secondary structure 



































..



Template SS confidence 















































































   711........720.........730.........740.........750.........760.........770.... .....780........
 
   528.530.........540.........550....
Predicted Secondary structure 






Query SS confidence 


























Query Sequence  ERISHRVAVMYLGQIVEIGPRRAVFEN
Query Conservation      


 

  
 

  
        
Alig confidence 

.























Template Conservation    . 


 

  
 

  

  


  
Template Sequence  VN. ADQILVIKDGCIVERGRHEALLSR
Template Known Secondary structure  T.
STT
Template Predicted Secondary structure  .






Template SS confidence 


























   789790 .........800.........810....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions