Job Description P75796 Confidence 97.44% Date Thu Jan 5 12:14:14 GMT 2012 Rank 129 Aligned Residues 130 % Identity 18% Template c3b9qA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:chloroplast srp receptor homolog, alpha subunit PDBTitle: the crystal structure of cpftsy from arabidopsis thaliana Resolution 1.75 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	S	F	S	L	Q	R	G	E	T	L	A	I	V	G	E	S	G	S	G	K	S	V	T	A	L	A	L	M	R	L	L	E	Q	A	G	G	L	V	Q	C	D	K	M	L	L	Q	R	R	S	R	E	V	I	E	L	S	E	Q	N	A	A	Q	M	R	H	V	R	G	A	D	M	A	M	I	F	Q	E	P
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	R	L	K	N	E	G	T	K	V	L	M	A	.	.	.	.
Template Known Secondary structure		S					S	S	S										T	T	S										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T							.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																																		.	.	.	.	.	190	.	.	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	S	L	N	P	V	F	T	V	G	E	Q	I	A	E	S	I	R	L	H	Q	N	A	S	R	E	E	A	M	V	E	A	K	R	M	L	D	Q	V	R	I	P	E	A	Q	T	I	L	S	R	Y	P	H	Q	L	S	G	G	M	R	Q	R	V	M	I	A	M	A	L	S	C	R	P	A	V	L	I	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	K	A	K	A	A	T	V	L	.	.	.	.	.	.	S	K	A	V	K	R	G	K	E	E	G	Y	D	V	V	L	C	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S																T																.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
																						199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.							.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		194	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure					.																				.	.	.	.
Query SS confidence					.																				.	.	.	.
Query Sequence		E	P	T	.	T	A	L	D	V	T	I	Q	A	Q	I	L	Q	L	I	K	V	L	Q	.	.	.	.	K	E	M	S	M	G	V	I	F	I	T
Query Conservation					.																				.	.	.	.
Alig confidence					.																				.	.	.	.
Template Conservation
Template Sequence		T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure						S	S																		T	T	S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions