Job Description P75796 Confidence 99.81% Date Thu Jan 5 12:14:14 GMT 2012 Rank 65 Aligned Residues 186 % Identity 12% Template c3a4mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.						.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		T	L	A	I	V	G	E	S	G	S	G	K	S	V	T	A	L	A	L	M	R	L	L	E	Q	A	G	G	L	V	Q	C	D	K	.	.	.	.	.	M	L	L	Q	R	R	S	R	E	V	I	E	L	S	E	Q	N	A	A	Q	M	R	H	V	R	G	A	D	M	A	M	I	F	Q	E	P	M	T	S	L	N
Query Conservation																																				.	.	.	.	.
Alig confidence																																				.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		L	I	I	L	T	G	L	P	G	V	G	K	S	T	F	S	K	N	L	A	K	I	L	S	K	N	N	I	D	V	I	V	L	G	S	D	L	I	R	E	S	F	P	V	W	K	E	K	Y	E	E	F	I	K	K	S	T	Y	R	L	I	D	S	A	L	K	N	Y	W	V	I	V	D	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S															T	T								T					T	T	S	S	S			T	T																		T	T	S						.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.
Query Sequence		P	V	F	T	V	G	E	Q	I	A	E	S	I	R	L	H	Q	N	A	S	R	E	E	A	M	V	E	A	K	R	M	L	D	Q	V	R	I	P	E	A	Q	T	I	L	S	R	Y	P	H	Q	L	S	G	G	M	R	Q	R	.	.	.	.	.	.	.	.	.	V	M	I	A	M	A	L	S	C	R	P	A	V
Query Conservation																																																												.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	N	Y	Y	N	S	M	R	R	D	L	I	N	I	A	K	K	Y	N	K	N	Y	A	I	I	Y	L	K	A	S	L	D	V	L	I	R	R	N	I	E	R	G	E	K	I	P	N	E	V	I	K	K	M	Y	E	K	F	D	E	P	G	K	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S				S														T	T																						T	T		S	S															T	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		L	I	A	D	E	P	T	T	A	L	D	V	T	I	Q	A	Q	I	L	Q	L	I	K	V	L	Q	K	E	M	S	M	G	V	I	F	I	T	H	D	M	G	V	V	A	E	I	A	D	R	V	L	.	.	V	M	Y	Q	G	E	A	V	E	T	G	T	V	E
Query Conservation																																																					.	.
Alig confidence																																	.	.																			.	.
Template Conservation																																	.	.
Template Sequence		Y	K	W	D	E	P	F	L	I	I	D	T	T	K	D	I	D	F	N	E	I	A	K	K	L	I	E	K	S	K	E	.	.	I	P	K	F	N	I	S	D	K	I	D	K	E	T	R	K	I	V	S	E	Y	I	K	S	K	K	L	D	K	D	K	I	K	E
Template Known Secondary structure			G	G	G			S					T	T	S																T	S	.	.																									T	T
Template Predicted Secondary structure																																	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.			.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions