Job Description P75796 Confidence 100.00% Date Thu Jan 5 12:14:14 GMT 2012 Rank 55 Aligned Residues 210 % Identity 20% Template c2pzfB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cystic fibrosis transmembrane conductance regulator; PDBTitle: minimal human cftr first nucleotide binding domain as a head-to-tail2 dimer with delta f508 Resolution 2.00 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	R	N	L	V	T	R	F	P	L	R	S	G	L	L	N	R	V	T	R	E	V	H	A	V	E	K	V	S	F	D	L	W	P	G	E	T	L	S	L	V	G	E	S	G	S	G	K	S	T	T	G	R	A	L	L	R	L	V	E	S	Q	G	G	E	I	I	F	N	G	Q	R	I	D	T	L	S	P
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template Sequence		V	V	M	E	N	V	T	A	F	W	E	E	G	G	T	.	.	.	.	.	.	.	.	.	P	V	L	K	D	I	N	F	K	I	E	R	G	Q	L	L	A	V	A	G	S	T	G	A	G	K	T	S	L	L	M	M	I	M	G	E	L	E	P	S	E	G	K	I	K	H	S	G	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	S	T	T	S		.	.	.	.	.	.	.	.	.		S										T	T								S	T	T	S	S									T	T	S	S			S								S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.										.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.		.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		G	K	L	Q	A	L	R	R	D	I	Q	F	I	F	Q	D	P	Y	A	S	L	D	P	R	Q	T	I	G	D	S	I	I	E	P	L	R	V	H	G	L	L	P	G	K	D	A	A	A	R	V	A	W	L	L	E	R	V	G	L	L	P	E	.	H	A	W	R	Y	P	H	E	F	S	G	G	Q	R	Q	R	I
Query Conservation																																																																.
Alig confidence		.	.	.	.	.	.	.	.											.	.					.																																						.
Template Conservation		.	.	.	.	.	.	.	.											.	.					.
Template Sequence		.	.	.	.	.	.	.	.	R	I	S	F	C	S	Q	F	S	W	.	.	I	M	P	G	.	T	I	K	E	N	I	I	G	V	S	Y	D	E	Y	R	Y	R	S	V	I	K	A	C	Q	L	E	E	D	I	S	K	F	A	E	K	D	N	I	V	L	G	E	G	G	I	T	L	S	G	G	Q	R	A	R	I
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T			.	.			S		.								T	T														T	T						T	T	S	T	T	G	G	G					T	T		T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.											.	.					.
Template SS confidence
										487	.	.	490	.	.	.	.	.	.			.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.
		473	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	I	A	R	A	L	A	L	N	P	K	V	I	I	A	D	E	A	V	S	A	L	D	V	S	I	R	G	Q	I	I	N	L	L	L	D	L	Q	R	D	F	G	I	A	Y	L	F	I	S	H	D	M	A	V	V	E	R	I	S	H	R	V	A	V	M	Y	L	G	Q	I	V	E	I	G	P	R	R	A	V	F
Query Conservation
Alig confidence																																										.																.
Template Conservation																																										.																.
Template Sequence		S	L	A	R	A	V	Y	K	D	A	D	L	Y	L	L	D	S	P	F	G	Y	L	D	V	L	T	E	K	E	I	F	E	S	C	V	C	K	L	M	A	.	N	K	T	R	I	L	V	T	S	K	M	E	H	L	K	.	K	A	D	K	I	L	I	L	H	E	G	S	S	Y	F	Y	G	T	F	S	E	L	Q
Template Known Secondary structure									S			S						S	T	T	T	T	S																	T	T	.	T	S														.			S							T	T
Template Predicted Secondary structure																																										.																.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.		.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
		553
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		635

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions