Job Description P75796 Confidence 100.00% Date Thu Jan 5 12:14:14 GMT 2012 Rank 1 Aligned Residues 459 % Identity 22% Template c1yqtA_ PDB info PDB header:hydrolyase/translation Chain: A: PDB Molecule:rnase l inhibitor; PDBTitle: rnase-l inhibitor Resolution 1.90 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	L	N	I	A	F	M	Q	D	Q	Q	K	I	A	A	V	R	N	L	S	F	S	L	Q	R	G	E	T	L	A	I	V	G	E	S	G	S	G	K	S	V	T	A	L	A	L	M	R	L	L	E	Q	A	G	G	L	V	Q	C	D	K	M	L	L	Q	R	R	S	R	E	V	I	E	L	S	E	Q	N	A
Query Conservation
Alig confidence									.	.	.	.																																												.	.	.	.	.
Template Conservation									.	.	.	.																																												.	.	.	.	.
Template Sequence		E	D	C	V	H	R	Y	.	.	.	.	G	V	N	A	F	V	L	Y	R	L	P	V	V	K	E	G	X	V	V	G	I	V	G	P	N	G	T	G	K	S	T	A	V	K	I	L	A	G	Q	L	I	P	N	.	.	.	.	.	L	C	G	D	N	D	S	W	D	G	V	I	R	A	F	R	G	N	E	L	Q
Template Known Secondary structure									.	.	.	.	S	T	T												T	T	S								T	T	S	S										T	S	S				.	.	.	.	.	T	T	T	T			S								T	T	T	S	T
Template Predicted Secondary structure									.	.	.	.																																												.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	M	R	H	V	R	G	A	D	M	A	M	I	F	Q	E	P	M	T	S	L	N	P	V	F	T	V	G	E	Q	I	A	E	S	I	R	L	H	Q	N	A	S	R	E	E	A	M	V	E	A	K	R	M	L	D	Q	V	R	I	P	E	A	Q	T	I	L	S	R	Y	P	H	Q	L	S	G	G	M	R	Q
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.																						.	.	.
Template Conservation																																		.	.	.	.	.	.	.																						.	.	.
Template Sequence		N	Y	F	E	K	L	K	N	G	E	I	R	P	V	V	K	P	Q	Y	V	D	L	I	P	K	A	V	K	G	K	V	I	.	.	.	.	.	.	.	E	L	L	K	K	A	D	E	T	G	K	L	E	E	V	V	K	A	L	E	L	.	.	.	E	N	V	L	E	R	E	I	Q	H	L	S	G	G	E	L	Q
Template Known Secondary structure									T	T	S								S		G	G	G	S	G	G	G			S	B			.	.	.	.	.	.	.								S	S	S									T	T		.	.	.	T	T	T	T	T	S	B	G	G	G
Template Predicted Secondary structure																																		.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	M	I	A	M	A	L	S	C	R	P	A	V	L	I	A	D	E	P	T	T	A	L	D	V	T	I	Q	A	Q	I	L	Q	L	I	K	V	L	Q	K	E	M	S	M	G	V	I	F	I	T	H	D	M	G	V	V	A	E	I	A	D	R	V	L	V	M	Y	Q	G	E	A	V	E	T	G	T	V	E	Q
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		R	V	A	I	A	A	A	L	L	R	N	A	T	F	Y	F	F	D	E	P	S	S	Y	L	D	I	R	Q	R	L	N	A	A	R	A	I	R	R	L	S	E	E	.	G	K	S	V	L	V	V	E	H	D	L	A	V	L	D	Y	L	S	D	I	I	H	V	V	Y	G	E	P	G	V	Y	G	I	F	S	Q	P
Template Known Secondary structure											S			S						S	T	T	T	T																			T	.	T								S										S									T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	F	H	A	P	Q	H	P	Y	T	R	A	L	L	A	A	V	P	Q	L	G	A	M	K	G	L	D	Y	P	R	R	F	P	L	I	S	L	E	H	P	A	K	Q	A	P	P	I	E	Q	K	T	V	V	D	G	E	P	V	L	R	V	R	N	L	V	T	R	F	P	L	R	S	G	L	L	N	R	V	T	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	T	R	N	G	I	N	E	F	L	R	G	Y	L	K	D	E	N	V	R	F	R	P	Y	E	I	K	F	T	K	T	G	E	R	V	E	I	E	R	E	T	L	V	T	Y	P	R	L	V	K	D	Y	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T			T	T	T	T				S	S	S							S	S	G	G	G	S	S																.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	H	A	V	E	K	V	S	F	D	L	W	P	G	E	T	L	S	L	V	G	E	S	G	S	G	K	S	T	T	G	R	A	L	L	R	L	V	E	S	Q	G	G	E	I	I	F	N	G	Q	R	I	D	T	L	S	P	G	K	L	Q	A	L	R	R	D	I	Q	F	I	F	Q	D	P	Y	A	S	L	D
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Sequence		G	S	F	R	L	E	V	E	P	G	E	I	K	K	G	E	V	I	G	I	V	G	P	N	G	I	G	K	T	T	F	V	K	X	L	A	G	V	E	E	P	T	E	G	K	I	E	W	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	Y	K	P	Q	Y	.	.	I	K	A	D
Template Known Secondary structure		T	T												T	T									T	T	S	S										T	S	S			S	B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.																	400	.	.	.	.	.	.	.			.	.	410	.
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	Q	T	I	G	D	S	I	I	E	P	L	R	V	H	G	L	L	P	G	K	D	A	A	A	R	V	A	W	L	L	E	R	V	G	L	L	P	E	H	A	W	R	Y	P	H	E	F	S	G	G	Q	R	Q	R	I	C	I	A	R	A	L	A	L	N	P	K	V	I	I	A	D	E	A	V	S	A	L	D
Query Conservation
Alig confidence														.	.	.	.	.																					.
Template Conservation														.	.	.	.	.																					.
Template Sequence		Y	E	G	T	V	Y	E	L	L	S	K	I	.	.	.	.	.	D	A	S	K	L	N	S	N	F	Y	K	T	E	L	L	K	P	L	G	I	.	I	D	L	Y	D	R	E	V	N	E	L	S	G	G	E	L	Q	R	V	A	I	A	A	T	L	L	R	D	A	D	I	Y	L	L	D	E	P	S	A	Y	L	D
Template Known Secondary structure			S	S	B									.	.	.	.	.						T								T	T	T	T	T	T		.	G	G	G	T	T	S	B	G	G	G																T	S			S							T	T	T	T
Template Predicted Secondary structure														.	.	.	.	.																					.
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.						.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.		.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	I	R	G	Q	I	I	N	L	L	L	D	L	Q	R	D	F	G	I	A	Y	L	F	I	S	H	D	M	A	V	V	E	R	I	S	H	R	V	A	V	M	Y	L	G	Q	I	V	E	I	G
Query Conservation
Alig confidence																																												.
Template Conservation																																												.
Template Sequence		V	E	Q	R	L	A	V	S	R	A	I	R	H	L	X	E	K	N	E	K	T	A	L	V	V	E	H	D	V	L	X	I	D	Y	V	S	D	R	L	X	V	F	.	E	G	E	P	G	K	Y	G
Template Known Secondary structure																				T								S										S						.				T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.		.	.	530	.	.	.	.	.